miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42698_zma-MIR159i:mirbase
Length = 252
Score = 186 bits (94), Expect = 5e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggtcttaaggcggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tggtcttaaggcggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagc 100
Query: 61 tgctcgttcatggttcccactgtcccatctcatc 94
||||||||||||||||||||||||||||||||||
Sbjct: 101 tgctcgttcatggttcccactgtcccatctcatc 134
Score = 170 bits (86), Expect = 3e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 127 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 226
Query: 187 gctgtttggagtgaagggagctctgc 212
||||||||||||||||||||||||||
Sbjct: 227 gctgtttggagtgaagggagctctgc 252
>42696_zma-MIR159g:mirbase
Length = 252
Score = 186 bits (94), Expect = 5e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 tggtcttaaggcggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tggtcttaaggcggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagc 100
Query: 61 tgctcgttcatggttcccactgtcccatctcatc 94
||||||||||||||||||||||||||||||||||
Sbjct: 101 tgctcgttcatggttcccactgtcccatctcatc 134
Score = 163 bits (82), Expect = 7e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 127 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 226
Query: 187 gctgtttggagtgaagggagctctgc 212
|||||||||||||||||||| |||||
Sbjct: 227 gctgtttggagtgaagggagttctgc 252
>42699_zma-MIR159j:mirbase
Length = 252
Score = 178 bits (90), Expect = 1e-45
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 tggtcttaaggcggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 41 tggtcttaaggcggtgctcccttcaaaccaataaacggtcgatctgatgggtggtacagc 100
Query: 61 tgctcgttcatggttcccactgtcccatctcatc 94
||||||||||||||||||||||||||||||||||
Sbjct: 101 tgctcgttcatggttcccactgtcccatctcatc 134
Score = 163 bits (82), Expect = 7e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 127 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 226
Query: 187 gctgtttggagtgaagggagctctgc 212
|||||||||| |||||||||||||||
Sbjct: 227 gctgtttggattgaagggagctctgc 252
>42691_zma-MIR159b:mirbase
Length = 221
Score = 178 bits (90), Expect = 1e-45
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 tggtcttaaggcggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 10 tggtcttaaggcggtgctcccttcaaaccaataaacggtcgatctgatgggtggtacagc 69
Query: 61 tgctcgttcatggttcccactgtcccatctcatc 94
||||||||||||||||||||||||||||||||||
Sbjct: 70 tgctcgttcatggttcccactgtcccatctcatc 103
Score = 151 bits (76), Expect = 3e-37
Identities = 89/92 (96%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 127 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 186
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 119 tgcttgagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgacc 177
Query: 187 gctgtttggagtgaagggagctctgcatcttg 218
|||||||||| |||||||||||||||||||||
Sbjct: 178 gctgtttggattgaagggagctctgcatcttg 209
>42697_zma-MIR159h:mirbase
Length = 200
Score = 170 bits (86), Expect = 3e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 127 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 174
Query: 187 gctgtttggagtgaagggagctctgc 212
||||||||||||||||||||||||||
Sbjct: 175 gctgtttggagtgaagggagctctgc 200
Score = 163 bits (82), Expect = 7e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 13 ggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagctgctcgttcatg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagctgctcgttcatg 60
Query: 73 gttcccactgtcccatctcatc 94
||||||||||||||||||||||
Sbjct: 61 gttcccactgtcccatctcatc 82
>42700_zma-MIR159k:mirbase
Length = 200
Score = 155 bits (78), Expect = 2e-38
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 127 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 186
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 115 tgcttgagatgggcttgtggtttgcatgaccgaggagctgcatcgtccccttcgttgacc 174
Query: 187 gctgtttggagtgaagggagctctgc 212
|||||||||| |||||||||||||||
Sbjct: 175 gctgtttggattgaagggagctctgc 200
Score = 147 bits (74), Expect = 4e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 13 ggtgctcccttcacaccaataaacggtcgatctgatgggtggtacagctgctcgttcatg 72
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ggtgctcccttcaaaccaataaacggtcgatctgatgggtggtacaactgctcgttcatg 60
Query: 73 gttcccactgtcccatctcatc 94
||||||||||||||||||||||
Sbjct: 61 gttcccactgtcccatctcatc 82
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 99.6 bits (50), Expect = 9e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 130 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 189
||||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||
Sbjct: 163 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtcccctt-gctggccgct 221
Query: 190 gtttggagtgaagggagctctgcatc 215
|||||| ||||||||||||||||||
Sbjct: 222 ctttggattgaagggagctctgcatc 247
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 gctgctcgttcatggttcccactgtcccatctcatc 94
||||||||||||||||||||||| ||| ||||||||
Sbjct: 65 gctgctcgttcatggttcccactatcctatctcatc 100
>42453_sof-MIR159b:mirbase
Length = 266
Score = 99.6 bits (50), Expect = 9e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 130 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 189
||||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||
Sbjct: 167 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtcccctt-gctggccgct 225
Query: 190 gtttggagtgaagggagctctgcatc 215
|||||| ||||||||||||||||||
Sbjct: 226 ctttggattgaagggagctctgcatc 251
Score = 63.9 bits (32), Expect = 5e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 43 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatc 94
||||| ||||||| | ||||||||||||||||||||||| ||| ||||||||
Sbjct: 52 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatc 103
>42452_sof-MIR159a:mirbase
Length = 265
Score = 99.6 bits (50), Expect = 9e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 130 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 189
||||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||
Sbjct: 166 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtcccctt-gctggccgct 224
Query: 190 gtttggagtgaagggagctctgcatc 215
|||||| ||||||||||||||||||
Sbjct: 225 ctttggattgaagggagctctgcatc 250
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 gctgctcgttcatggttcccactgtcccatctcatc 94
||||||||||||||||||||||| ||| ||||||||
Sbjct: 68 gctgctcgttcatggttcccactatcctatctcatc 103
>42494_sbi-MIR159:mirbase
Length = 226
Score = 95.6 bits (48), Expect = 1e-20
Identities = 76/84 (90%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 130 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 189
||||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||
Sbjct: 144 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtcccctt-gctggccgct 202
Query: 190 gtttggagtgaagggagctctgca 213
|||||| ||||||||||||||||
Sbjct: 203 ctttggattgaagggagctctgca 226
Score = 63.9 bits (32), Expect = 5e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 47 atgggtggtacagctgctcgttcatggttcccactgtcccatctcatc 94
||||||||| | ||||||||||||||||||||||| ||| ||||||||
Sbjct: 38 atgggtggttccgctgctcgttcatggttcccactatcctatctcatc 85
>42690_zma-MIR159a:mirbase
Length = 246
Score = 91.7 bits (46), Expect = 2e-19
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 130 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 189
||||||| |||||||||||||||||||||||||||||| || |||||| | || |||||
Sbjct: 147 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgccccctt-gctggccgct 205
Query: 190 gtttggagtgaagggagctctgcatc 215
|||||| ||||||||||||||||||
Sbjct: 206 ctttggattgaagggagctctgcatc 231
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 gctgctcgttcatggttcccactgtcccatctcatc 94
||||||||||||||||||||||| ||| ||||||||
Sbjct: 69 gctgctcgttcatggttcccactatcctatctcatc 104
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 83.8 bits (42), Expect = 5e-17
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 132 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 191
||||| |||||||||||||||||| |||||||| || ||| |||| || ||||||||||
Sbjct: 98 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 156
Query: 192 ttggagtgaagggagctctgca 213
||||| ||||||||||||||||
Sbjct: 157 ttggattgaagggagctctgca 178
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 57 cagctgctcgttcatggttcccactgtcccatctc 91
|||||||| |||||||||||||||| ||| |||||
Sbjct: 49 cagctgcttgttcatggttcccactatcctatctc 83
>42634_tae-MIR159a:mirbase
Length = 177
Score = 81.8 bits (41), Expect = 2e-16
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 142 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 201
||||||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||
Sbjct: 106 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 164
Query: 202 gggagctctgcat 214
|||||||||||||
Sbjct: 165 gggagctctgcat 177
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 57 cagctgctcgttcatggttcccactgtcccatctc 91
||||||||||||||||||||||||| ||| |||||
Sbjct: 48 cagctgctcgttcatggttcccactatcctatctc 82
>42455_sof-MIR159d:mirbase
Length = 265
Score = 81.8 bits (41), Expect = 2e-16
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 139 gcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagt 198
||||||||||||||||||||| ||||||| ||||||||| | || ||||| |||||| |
Sbjct: 175 gcttgtggtttgcatgaccgatgagctgcaccgtcccctt-gctggccgctctttggatt 233
Query: 199 gaagggagctctgcatc 215
|||||||||||||||||
Sbjct: 234 gaagggagctctgcatc 250
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 gctgctcgttcatggttcccactgtcccatctcatc 94
||||||||||||||||||||||| ||| ||||||||
Sbjct: 68 gctgctcgttcatggttcccactatcctatctcatc 103
>42695_zma-MIR159f:mirbase
Length = 215
Score = 77.8 bits (39), Expect = 3e-15
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 130 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 189
||||||| |||||||||||||||||||||||||||||| || |||| | | || |||||
Sbjct: 134 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgaccccgt-gctggccgct 192
Query: 190 gtttggagtgaagggagctctgc 212
|||||| |||||||||||||||
Sbjct: 193 ctttggattgaagggagctctgc 215
Score = 60.0 bits (30), Expect = 8e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 49 gggtggtacagctgctcgttcatggttcccactgtcccatctcatc 94
||||||| | ||||||||||||||||||||||| ||| ||||||||
Sbjct: 37 gggtggttccgctgctcgttcatggttcccactatcctatctcatc 82
>41868_far-MIR159:mirbase
Length = 200
Score = 77.8 bits (39), Expect = 3e-15
Identities = 76/87 (87%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 132 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 191
||||| ||| ||||| | ||||||||||||||| || ||||||||| || || ||||| |
Sbjct: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccct-cgctggccgctct 169
Query: 192 ttggagtgaagggagctctgcatcttg 218
||||| |||||||||||||||||||||
Sbjct: 170 ttggattgaagggagctctgcatcttg 196
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 49 gggtggtacagctgctcgttcatggttcccact 81
|||||||||||||||||||||||||||||||||
Sbjct: 54 gggtggtacagctgctcgttcatggttcccact 86
>42456_sof-MIR159e:mirbase
Length = 264
Score = 73.8 bits (37), Expect = 5e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 130 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 189
||||||| |||||||||||||||||||||| ||||||| ||||||||| | || |||||
Sbjct: 165 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtcccctt-gctggccgct 223
Query: 190 gtttggagtgaagggagctct 210
|||||| |||| ||||||||
Sbjct: 224 ctttggattgaaaggagctct 244
Score = 63.9 bits (32), Expect = 5e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 43 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatc 94
||||| ||||||| | ||||||||||||||||||||||| ||| ||||||||
Sbjct: 51 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatc 102
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 182 tgaccgctgtttggagtgaagggagctctgcatcttg 218
||||||||||||||| |||||||||||||||||||||
Sbjct: 2 tgaccgctgtttggattgaagggagctctgcatcttg 38
>41918_osa-MIR159b:mirbase
Length = 188
Score = 61.9 bits (31), Expect = 2e-10
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 132 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 191
||||| |||||||||||||||||||| |||||| | || | |||| | ||||| || |
Sbjct: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactcctt-gctgaccactct 158
Query: 192 ttggagtgaagggagctctgcatcttg 218
||||| |||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctgcatcttg 185
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 42 atctgatgggtggtacagctgctcgttcatggttcccact 81
|||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 41 atctgaagggtgatacagctgcttgttcatggttcccact 80
>41917_osa-MIR159a:mirbase
Length = 272
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 tttggagtgaagggagctctgcatctt 217
|||||| ||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>41916_osa-MIR159a:mirbase
Length = 272
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 tttggagtgaagggagctctgcatctt 217
|||||| ||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 191 tttggagtgaagggagctctgcatcttgctc 221
|||||| ||||||||||||| ||||||||||
Sbjct: 152 tttggattgaagggagctctacatcttgctc 182
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 191 tttggagtgaagggagctctgcatct 216
|||||| |||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>40338_rco-MIR159:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 189 tgtttggagtgaagggagctctgcatct 216
|||||||| ||||||||||||| |||||
Sbjct: 153 tgtttggattgaagggagctctacatct 180
