miRNEST 2.0, an integrative microRNA resource :: BLAST
>42692_zma-MIR159c:mirbase
Length = 217
Score = 398 bits (201), Expect = e-112
Identities = 201/201 (100%)
Strand = Plus / Plus
Query: 3 taagaaaggcgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 taagaaaggcgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgc 65
Query: 63 agctgccggttcatggatacctctctggtgcagcaatggccgctgctcacctctgcactt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 agctgccggttcatggatacctctctggtgcagcaatggccgctgctcacctctgcactt 125
Query: 123 gcatgggtgtgcatgacccgggagatgagcccgccatcatctttccctcgtgcttggatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gcatgggtgtgcatgacccgggagatgagcccgccatcatctttccctcgtgcttggatt 185
Query: 183 gaagggagctcctctctgtct 203
|||||||||||||||||||||
Sbjct: 186 gaagggagctcctctctgtct 206
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 295 bits (149), Expect = 7e-81
Identities = 185/196 (94%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 4 aagaaaggcgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgca 63
|||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 aagaaaagcgaacaaagagctcccttcgatccaatccaggaggggaagtggtcggttgca 104
Query: 64 gctgccggttcatggatacctctctggtgcagcaatggccgctgctcacctctgcacttg 123
||||||||||||||||| ||||||||||||||||||| | | ||||||| |||||||||
Sbjct: 105 gctgccggttcatggatgcctctctggtgcagcaatgactgatgctcac--ctgcacttg 162
Query: 124 catgggtgtgcatgacccgggagatgagcccgccatcatctttccctcgtgcttggattg 183
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 163 catgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgtgcttggattg 222
Query: 184 aagggagctcctctct 199
||||||||||||||||
Sbjct: 223 aagggagctcctctct 238
>42454_sof-MIR159c:mirbase
Length = 238
Score = 295 bits (149), Expect = 7e-81
Identities = 185/196 (94%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 4 aagaaaggcgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgca 63
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 aagaaaagtgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgca 89
Query: 64 gctgccggttcatggatacctctctggtgcagcaatggccgctgctcacctctgcacttg 123
||||||||||||||||| ||||||||||||||||||| | ||||||| |||||||||
Sbjct: 90 gctgccggttcatggatgcctctctggtgcagcaatgactaatgctcac--ctgcacttg 147
Query: 124 catgggtgtgcatgacccgggagatgagcccgccatcatctttccctcgtgcttggattg 183
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 148 catgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgtgcttggattg 207
Query: 184 aagggagctcctctct 199
||||||||||||||||
Sbjct: 208 aagggagctcctctct 223
>42693_zma-MIR159d:mirbase
Length = 217
Score = 278 bits (140), Expect = 2e-75
Identities = 179/190 (94%), Gaps = 4/190 (2%)
Strand = Plus / Plus
Query: 12 cgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccgg 71
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 15 cgatcgaagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccgg 74
Query: 72 ttcatggatacctctctggtgcagcaatggcc--gctgctcacctctgcacttgcatggg 129
|||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||
Sbjct: 75 ttcatggatacctctctggtgcagcaatggccgagatgctcac--ctgcacttgcatggg 132
Query: 130 tgtgcatgacccgggagatgagcccgccatcatctttccctcgtgcttggattgaaggga 189
|||||||||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 133 tgtgcatgacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaaggga 192
Query: 190 gctcctctct 199
||||||||||
Sbjct: 193 gctcctctct 202
>41730_bdi-MIR159:mirbase
Length = 234
Score = 172 bits (87), Expect = 7e-44
Identities = 157/178 (88%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 17 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 76
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 27 gaagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcat 86
Query: 77 ggatacctctctggtgca-gcaatggccgctgctcacctctgcacttgcatgggtgtgca 135
|||||||| ||||||||| ||| || | | | ||| |||| ||||| ||| ||||
Sbjct: 87 ggatacctgtctggtgcatgcagtg--tggtaatagcctgcgcacctgcatcggtttgca 144
Query: 136 tgacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctc 193
||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||
Sbjct: 145 tgacccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggagctc 202
>41922_osa-MIR159f:mirbase
Length = 188
Score = 109 bits (55), Expect = 9e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 20 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 79
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 80 tacctct 86
|||||||
Sbjct: 73 tacctct 79
>41921_osa-MIR159e:mirbase
Length = 191
Score = 93.7 bits (47), Expect = 5e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 17 gaagagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttca 75
||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||||||||
Sbjct: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
Query: 76 tggatacctct 86
|||||||||||
Sbjct: 70 tggatacctct 80
>41920_osa-MIR159d:mirbase
Length = 189
Score = 93.7 bits (47), Expect = 5e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 20 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 79
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 80 tacctct 86
|||||||
Sbjct: 73 tacctct 79
>41919_osa-MIR159c:mirbase
Length = 197
Score = 91.7 bits (46), Expect = 2e-19
Identities = 147/178 (82%), Gaps = 7/178 (3%)
Strand = Plus / Plus
Query: 20 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 79
||||||| ||||||||||| |||||| ||||||||| || ||||||||||| ||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatgga 72
Query: 80 tacctctctggtgcagcaatggccgc--tgct-cacctctgcacttgcatgggtgtgcat 136
||||||| |||| ||||| || |||| | |||||||||||||||| |||||
Sbjct: 73 tacctctggagtgc----atggcagcaatgctgtaggcctgcacttgcatgggtttgcat 128
Query: 137 gacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcc 194
|||||||||||||| ||| |||| |||| | || || |||||||||||||||||||
Sbjct: 129 gacccgggagatgaacccaccattgtcttcctctattgattggattgaagggagctcc 186
>41302_ptc-MIR159d:mirbase
Length = 194
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 175 cttggattgaagggagctcct 195
|||||||||||||||||||||
Sbjct: 165 cttggattgaagggagctcct 185
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 172 gtgcttggattgaagggagctcct 195
||||||||| ||||||||||||||
Sbjct: 172 gtgcttggactgaagggagctcct 195
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 172 gtgcttggattgaagggagctcct 195
||||||||| ||||||||||||||
Sbjct: 170 gtgcttggactgaagggagctcct 193
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 176 ttggattgaagggagctcct 195
||||||||||||||||||||
Sbjct: 196 ttggattgaagggagctcct 215
>39806_aly-MIR159c:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 176 ttggattgaagggagctcct 195
||||||||||||||||||||
Sbjct: 198 ttggattgaagggagctcct 217
>39730_smo-MIR159:mirbase
Length = 279
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 cttggattgaagggagctcc 194
||||||||||||||||||||
Sbjct: 249 cttggattgaagggagctcc 268
>39424_pta-MIR319:mirbase
Length = 206
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 175 cttggattgaagggagctcc 194
||||||||||||||||||||
Sbjct: 27 cttggattgaagggagctcc 8
>39419_pta-MIR159c:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 cttggattgaagggagctcc 194
||||||||||||||||||||
Sbjct: 49 cttggattgaagggagctcc 68
>39417_pta-MIR159a:mirbase
Length = 210
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 cttggattgaagggagctcc 194
||||||||||||||||||||
Sbjct: 184 cttggattgaagggagctcc 203
