miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36367_dme-mir-31a:mirbase
          Length = 92

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tccgttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tccgttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagc 60

                                          
Query: 61 gctatgctgcatctagtcagttgttcaatgga 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 gctatgctgcatctagtcagttgttcaatgga 92




>37136_dse-mir-31a:mirbase
          Length = 92

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tccgttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tccgttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagc 60

                                          
Query: 61 gctatgctgcatctagtcagttgttcaatgga 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 gctatgctgcatctagtcagttgttcaatgga 92




>37212_dsi-mir-31a:mirbase
          Length = 92

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tccgttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tccgttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagc 60

                                          
Query: 61 gctatgctgcatctagtcagttgttcaatgga 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 gctatgctgcatctagtcagttgttcaatgga 92




>37504_dya-mir-31a:mirbase
          Length = 92

 Score =  168 bits (85), Expect = 4e-43
 Identities = 88/89 (98%)
 Strand = Plus / Plus

                                                                      
Query: 4  gttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagcgct 63
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4  gttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagatcgct 63

                                       
Query: 64 atgctgcatctagtcagttgttcaatgga 92
          |||||||||||||||||||||||||||||
Sbjct: 64 atgctgcatctagtcagttgttcaatgga 92




>36176_der-mir-31a:mirbase
          Length = 92

 Score =  167 bits (84), Expect = 2e-42
 Identities = 90/92 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  tccgttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagc 60
          |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 1  tccgttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgcttttaaagagc 60

                                          
Query: 61 gctatgctgcatctagtcagttgttcaatgga 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 gctatgctgcatctagtcagttgttcaatgga 92




>36098_dan-mir-31a:mirbase
          Length = 92

 Score =  129 bits (65), Expect = 4e-31
 Identities = 83/89 (93%)
 Strand = Plus / Plus

                                                                      
Query: 4  gttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagcgct 63
          |||| ||||||||||||||||||||||||||||||||| ||| ||| |||  ||||||||
Sbjct: 4  gttgttaaattggcaagatgtcggcatagctgacgttggaaaacgaattttgagagcgct 63

                                       
Query: 64 atgctgcatctagtcagttgttcaatgga 92
          |||||||||||||||||||||||||||||
Sbjct: 64 atgctgcatctagtcagttgttcaatgga 92




>36847_dpe-mir-31a:mirbase
          Length = 92

 Score =  129 bits (65), Expect = 4e-31
 Identities = 83/89 (93%)
 Strand = Plus / Plus

                                                                      
Query: 4  gttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagcgct 63
          ||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||| ||||
Sbjct: 4  gttggtaaattggcaagatgtcggcatagctgaagttgaaaagcgatctttgagaacgct 63

                                       
Query: 64 atgctgcatctagtcagttgttcaatgga 92
          ||||||||||||||||||| |||||||||
Sbjct: 64 atgctgcatctagtcagttattcaatgga 92




>36923_dps-mir-31a:mirbase
          Length = 92

 Score =  129 bits (65), Expect = 4e-31
 Identities = 83/89 (93%)
 Strand = Plus / Plus

                                                                      
Query: 4  gttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagcgct 63
          ||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||| ||||
Sbjct: 4  gttggtaaattggcaagatgtcggcatagctgaagttgaaaagcgatctttgagaacgct 63

                                       
Query: 64 atgctgcatctagtcagttgttcaatgga 92
          ||||||||||||||||||| |||||||||
Sbjct: 64 atgctgcatctagtcagttattcaatgga 92




>37350_dvi-mir-31a:mirbase
          Length = 92

 Score = 99.6 bits (50), Expect = 3e-22
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                      
Query: 11 aattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagcgctatgctgc 70
          ||||||||||||||||||||||||||||||  ||||||  |||  | |||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctgacgtttgaaagcgcatttttatagcgctatgctgc 70

                                
Query: 71 atctagtcagttgttcaatgga 92
          |||||||||||| |||||||||
Sbjct: 71 atctagtcagttattcaatgga 92




>36264_dgr-mir-31a:mirbase
          Length = 91

 Score = 93.7 bits (47), Expect = 2e-20
 Identities = 81/90 (90%), Gaps = 3/90 (3%)
 Strand = Plus / Plus

                                                                      
Query: 4  gttggtaaattggcaagatgtcggcatagctgacgttgaaaagcg-attttgaagagcgc 62
          |||||| ||||||||||||||||||||||||||||||  |||||| || ||  | |||||
Sbjct: 4  gttggtgaattggcaagatgtcggcatagctgacgtttgaaagcgcatctt--atagcgc 61

                                        
Query: 63 tatgctgcatctagtcagttgttcaatgga 92
          |||||||||||||||||||| |||||||||
Sbjct: 62 tatgctgcatctagtcagttattcaatgga 91




>36774_dmo-mir-31a:mirbase
          Length = 91

 Score = 91.7 bits (46), Expect = 8e-20
 Identities = 74/82 (90%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 aattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagcgctatgctgc 70
          ||||||||||||||||||||||||||||||  ||||||  || | | |||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctgacgtttcaaagcgcatt-gcatagcgctatgctgc 69

                                
Query: 71 atctagtcagttgttcaatgga 92
          |||||||||||| |||||||||
Sbjct: 70 atctagtcagttattcaatgga 91




>37427_dwi-mir-31a:mirbase
          Length = 88

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 11 aattggcaagatgtcggcatagctga 36
          ||||||||||||||||||||||||||
Sbjct: 12 aattggcaagatgtcggcatagctga 37



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 58 agcgctatgctgcatctagtcagtt 82
          |||||||||||||||||||||||||
Sbjct: 53 agcgctatgctgcatctagtcagtt 77




>35003_dpu-mir-31:mirbase
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 15 ggcaagatgtcggcatagctgacgt 39
          |||||||||||||||||||||||||
Sbjct: 22 ggcaagatgtcggcatagctgacgt 46




>35356_ame-mir-31a:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ggcaagatgtcggcatagctga 36
          ||||||||||||||||||||||
Sbjct: 28 ggcaagatgtcggcatagctga 49




>37575_ngi-mir-31a:mirbase
          Length = 72

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ggcaagatgtcggcatagctga 36
          ||||||||||||||||||||||
Sbjct: 4  ggcaagatgtcggcatagctga 25




>37607_nlo-mir-31a:mirbase
          Length = 72

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ggcaagatgtcggcatagctga 36
          ||||||||||||||||||||||
Sbjct: 4  ggcaagatgtcggcatagctga 25




>37643_nvi-mir-31a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ggcaagatgtcggcatagctga 36
          ||||||||||||||||||||||
Sbjct: 28 ggcaagatgtcggcatagctga 49




>37720_tca-mir-31:mirbase
          Length = 77

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ggcaagatgtcggcatagctga 36
          ||||||||||||||||||||||
Sbjct: 12 ggcaagatgtcggcatagctga 33




>37719_tca-mir-31:mirbase
          Length = 77

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ggcaagatgtcggcatagctga 36
          ||||||||||||||||||||||
Sbjct: 12 ggcaagatgtcggcatagctga 33




>36265_dgr-mir-31b:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 13 ttggcaagatgtcggcatagctgac 37
          ||||||||||||||| |||||||||
Sbjct: 13 ttggcaagatgtcggaatagctgac 37




>35182_aae-mir-31:mirbase
          Length = 149

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          |||||||||||| |||||||||||
Sbjct: 50 ttggcaagatgttggcatagctga 73




>36013_cqu-mir-31:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          |||||||||||| |||||||||||
Sbjct: 11 ttggcaagatgttggcatagctga 34




>36099_dan-mir-31b:mirbase
          Length = 95

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 3  ttggcaagatgtcggaatagctga 26




>36177_der-mir-31b:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36




>36369_dme-mir-31b:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36




>36370_dme-mir-31b:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36




>36775_dmo-mir-31b:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36




>36848_dpe-mir-31b:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 3  ttggcaagatgtcggaatagctga 26




>36924_dps-mir-31b:mirbase
          Length = 89

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 4  ttggcaagatgtcggaatagctga 27




>37137_dse-mir-31b:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36




>37213_dsi-mir-31b:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36




>37351_dvi-mir-31b:mirbase
          Length = 126

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36




>37428_dwi-mir-31b:mirbase
          Length = 138

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 11 ttggcaagatgtcggaatagctga 34




>37505_dya-mir-31b:mirbase
          Length = 127

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 ttggcaagatgtcggcatagctga 36
          ||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggaatagctga 36