miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36370_dme-mir-31b:mirbase
Length = 127
Score = 252 bits (127), Expect = 5e-68
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgaacatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgaacatttta 60
Query: 61 tcgtccgaaaaaatgtgattatttttgaaaagcggctatgcctcatctagtcaattgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtccgaaaaaatgtgattatttttgaaaagcggctatgcctcatctagtcaattgcat 120
Query: 121 tactttg 127
|||||||
Sbjct: 121 tactttg 127
>37137_dse-mir-31b:mirbase
Length = 127
Score = 228 bits (115), Expect = 8e-61
Identities = 124/127 (97%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgaacatttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgagcctctta 60
Query: 61 tcgtccgaaaaaatgtgattatttttgaaaagcggctatgcctcatctagtcaattgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtccgaaaaaatgtgattatttttgaaaagcggctatgcctcatctagtcaattgcat 120
Query: 121 tactttg 127
|||||||
Sbjct: 121 tactttg 127
>37213_dsi-mir-31b:mirbase
Length = 127
Score = 228 bits (115), Expect = 8e-61
Identities = 124/127 (97%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgaacatttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgagcctctta 60
Query: 61 tcgtccgaaaaaatgtgattatttttgaaaagcggctatgcctcatctagtcaattgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtccgaaaaaatgtgattatttttgaaaagcggctatgcctcatctagtcaattgcat 120
Query: 121 tactttg 127
|||||||
Sbjct: 121 tactttg 127
>36177_der-mir-31b:mirbase
Length = 127
Score = 220 bits (111), Expect = 2e-58
Identities = 123/127 (96%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgaacatttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgagcctctta 60
Query: 61 tcgtccgaaaaaatgtgattatttttgaaaagcggctatgcctcatctagtcaattgcat 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtccgaaaaaatgtgaatatttttgaaaagcggctatgcctcatctagtcaattgcat 120
Query: 121 tactttg 127
|||||||
Sbjct: 121 tactttg 127
>37505_dya-mir-31b:mirbase
Length = 127
Score = 212 bits (107), Expect = 5e-56
Identities = 122/127 (96%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgaacatttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcacagcggatcgagcctttga 60
Query: 61 tcgtccgaaaaaatgtgattatttttgaaaagcggctatgcctcatctagtcaattgcat 120
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtccgaaaaaatgtgaatattttttaaaagcggctatgcctcatctagtcaattgcat 120
Query: 121 tactttg 127
|||||||
Sbjct: 121 tactttg 127
>36775_dmo-mir-31b:mirbase
Length = 127
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 91 agcggctatgcctcatctagtcaattgcatt 121
|||||||||||||||||||||||||||||||
Sbjct: 91 agcggctatgcctcatctagtcaattgcatt 121
>37351_dvi-mir-31b:mirbase
Length = 126
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 91 agcggctatgcctcatctagtcaattgcatt 121
|||||||||||||||||||||||||||||||
Sbjct: 90 agcggctatgcctcatctagtcaattgcatt 120
>36265_dgr-mir-31b:mirbase
Length = 126
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 caaataatgaatttggcaagatgtcggaatagctgagagcaca 43
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 caaataatgaatttggcaagatgtcggaatagctgacagcaca 43
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 91 agcggctatgcctcatctagtcaattgcatt 121
|||||||||||||||||||||||||||||||
Sbjct: 90 agcggctatgcctcatctagtcaattgcatt 120
>36099_dan-mir-31b:mirbase
Length = 95
Score = 75.8 bits (38), Expect = 7e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 11 atttggcaagatgtcggaatagctgagagcacagcggatcga 52
|||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 atttggcaagatgtcggaatagctgagagcacagaggatcga 42
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 89 aaagcggctatgcctcatctagtcaat 115
|||||||||||||||||||||||||||
Sbjct: 69 aaagcggctatgcctcatctagtcaat 95
>36924_dps-mir-31b:mirbase
Length = 89
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 84 tttgaaaagcggctatgcctcatctagtcaattgcatt 121
||||||| ||||||||||||||||||||||||||||||
Sbjct: 45 tttgaaatgcggctatgcctcatctagtcaattgcatt 82
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 10 aatttggcaagatgtcggaatagctgagagca 41
||||||||||||||||||||||||||||||||
Sbjct: 1 aatttggcaagatgtcggaatagctgagagca 32
>36848_dpe-mir-31b:mirbase
Length = 77
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 atttggcaagatgtcggaatagctgagagca 41
|||||||||||||||||||||||||||||||
Sbjct: 1 atttggcaagatgtcggaatagctgagagca 31
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 84 tttgaaaagcggctatgcctcatctagtcaattg 117
||||||| ||||||||||||||||||||||||||
Sbjct: 44 tttgaaatgcggctatgcctcatctagtcaattg 77
>37428_dwi-mir-31b:mirbase
Length = 138
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 93 cggctatgcctcatctagtcaattgcattactttg 127
|||||||||||||||||||||||||||||| ||||
Sbjct: 104 cggctatgcctcatctagtcaattgcattagtttg 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atttggcaagatgtcggaatagctga 36
||||||||||||||||||||||||||
Sbjct: 9 atttggcaagatgtcggaatagctga 34
>36098_dan-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36176_der-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36264_dgr-mir-31a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36367_dme-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36368_dme-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36774_dmo-mir-31a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36847_dpe-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>36923_dps-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37136_dse-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37212_dsi-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37350_dvi-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
>37427_dwi-mir-31a:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 14 ttggcaagatgtcggcatagctga 37
>37504_dya-mir-31a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 13 ttggcaagatgtcggaatagctga 36
||||||||||||||| ||||||||
Sbjct: 13 ttggcaagatgtcggcatagctga 36
