miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36378_dme-mir-87:mirbase
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 aacacatttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacacatttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccgg 60
Query: 61 ttgagcaaaatttcaggtgtgtgagaaatgtgtttagca 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgagcaaaatttcaggtgtgtgagaaatgtgtttagca 99
>37141_dse-mir-87:mirbase
Length = 92
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 3 cacatttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccggtt 62
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 cacatttcattcgcgcctgtatcttgctgaaccgctgccatcatggccaacgatccggtt 60
Query: 63 gagcaaaatttcaggtgtgtgagaaatgtgtt 94
||||||||||||||||||||||||||||||||
Sbjct: 61 gagcaaaatttcaggtgtgtgagaaatgtgtt 92
>37216_dsi-mir-87:mirbase
Length = 92
Score = 174 bits (88), Expect = 8e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 3 cacatttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccggtt 62
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 cacatttcattcgcgcctgtatcttgctgaaccgctgccatcatggccaacgatccggtt 60
Query: 63 gagcaaaatttcaggtgtgtgagaaatgtgtt 94
||||||||||||||||||||||||||||||||
Sbjct: 61 gagcaaaatttcaggtgtgtgagaaatgtgtt 92
>36181_der-mir-87:mirbase
Length = 92
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 6 atttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccggttgag 65
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 4 atttcattcgcgcctgtatcttgctgaaccgttgccattatggcctacgatccggttgag 63
Query: 66 caaaatttcaggtgtgtgagaaatgtgtt 94
|||||||||||||||||||||||| ||||
Sbjct: 64 caaaatttcaggtgtgtgagaaatttgtt 92
>37509_dya-mir-87:mirbase
Length = 92
Score = 121 bits (61), Expect = 1e-28
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 6 atttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccggttgag 65
||||||||||||||||||||||||||||||| | | ||||||| | |||||||||||||
Sbjct: 4 atttcattcgcgcctgtatcttgctgaaccgttacaattatggtcttcgatccggttgag 63
Query: 66 caaaatttcaggtgtgtgagaaatgtgtt 94
|||||||||||||||||||||||| ||||
Sbjct: 64 caaaatttcaggtgtgtgagaaatttgtt 92
>36103_dan-mir-87:mirbase
Length = 92
Score = 105 bits (53), Expect = 6e-24
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 6 atttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatccggttgag 65
||||||||||||||||||||||||||||||| | || |||||| | |||||||||||
Sbjct: 4 atttcattcgcgcctgtatcttgctgaaccgttaccgatatggcacagaatccggttgag 63
Query: 66 caaaatttcaggtgtgtgagaaatgtgtt 94
|||||||||||||||||||||||| ||||
Sbjct: 64 caaaatttcaggtgtgtgagaaatttgtt 92
>36928_dps-mir-87:mirbase
Length = 98
Score = 93.7 bits (47), Expect = 2e-20
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 6 atttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatcc-ggttga 64
||||||||||||||||||||||||||||||| ||||| |||| | |||| ||||||
Sbjct: 4 atttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggttga 63
Query: 65 gcaaaatttcaggtgtgtgagaaatgtgtttagca 99
||||||||||||||||||||||||| |||| ||||
Sbjct: 64 gcaaaatttcaggtgtgtgagaaatttgttaagca 98
>36269_dgr-mir-87:mirbase
Length = 92
Score = 91.7 bits (46), Expect = 9e-20
Identities = 78/87 (89%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 6 atttcattcgcgcctgtatcttgctgaaccgctgccattatggc---caacgatccggtt 62
||||||||||||||||||||||||||||||| | ||||| || | ||| ||||||||
Sbjct: 4 atttcattcgcgcctgtatcttgctgaaccgttaccattgtgacatccaa--atccggtt 61
Query: 63 gagcaaaatttcaggtgtgtgagaaat 89
|||||||||||||||||||||||||||
Sbjct: 62 gagcaaaatttcaggtgtgtgagaaat 88
>36852_dpe-mir-87:mirbase
Length = 93
Score = 91.7 bits (46), Expect = 9e-20
Identities = 80/90 (88%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 6 atttcattcgcgcctgtatcttgctgaaccgctgccattatggccaacgatcc-ggttga 64
||||||||||||||||||||||||||||||| ||||| |||| | |||| ||||||
Sbjct: 4 atttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggttga 63
Query: 65 gcaaaatttcaggtgtgtgagaaatgtgtt 94
||||||||||||||||||||||||| ||||
Sbjct: 64 gcaaaatttcaggtgtgtgagaaatttgtt 93
>37433_dwi-mir-87-1:mirbase
Length = 93
Score = 75.8 bits (38), Expect = 5e-15
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 6 atttcattcgcgcctgtatcttgctgaaccgctgcca-ttatggccaacgat-ccggttg 63
||||||||||||||||||||||||||||||| | ||| || || || | | |||||||
Sbjct: 4 atttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcatcatttccggttg 63
Query: 64 agcaaaatttcaggtgtgtgagaaat 89
||||||||||||||||||||||||||
Sbjct: 64 agcaaaatttcaggtgtgtgagaaat 89
>36779_dmo-mir-87:mirbase
Length = 92
Score = 73.8 bits (37), Expect = 2e-14
Identities = 75/86 (87%), Gaps = 5/86 (5%)
Strand = Plus / Plus
Query: 7 tttcattcgcgcctgtatcttgctgaaccgctgccattatggc---caacgatccggttg 63
|||||||||||||||||||||||||||||| | | ||| | | ||| |||||||||
Sbjct: 5 tttcattcgcgcctgtatcttgctgaaccgttacaattgtcacatccaa--atccggttg 62
Query: 64 agcaaaatttcaggtgtgtgagaaat 89
||||||||||||||||||||||||||
Sbjct: 63 agcaaaatttcaggtgtgtgagaaat 88
>37355_dvi-mir-87:mirbase
Length = 92
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 55 atccggttgagcaaaatttcaggtgtgtgagaaat 89
|||||||||||||||||||||||||||||||||||
Sbjct: 54 atccggttgagcaaaatttcaggtgtgtgagaaat 88
>37434_dwi-mir-87-2:mirbase
Length = 93
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 56 tccggttgagcaaaatttcaggtgtgtgagaaat 89
||||||||||||||||||||||||||||||||||
Sbjct: 56 tccggttgagcaaaatttcaggtgtgtgagaaat 89
>35361_ame-mir-87-1:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 62 tgagcaaaatttcaggtgtgtgag 85
|||||||| |||||||||||||||
Sbjct: 71 tgagcaaagtttcaggtgtgtgag 94
