miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36384_dme-mir-100:mirbase
          Length = 100

 Score =  198 bits (100), Expect = 5e-52
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                                   
Query: 61  attatgggagtctgtcaatgcaaacaactggtttttggca 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  attatgggagtctgtcaatgcaaacaactggtttttggca 100




>36932_dps-mir-100:mirbase
          Length = 100

 Score =  190 bits (96), Expect = 1e-49
 Identities = 99/100 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60

                                                   
Query: 61  attatgggagtctgtcaatgcaaacaactggtttttggca 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  attatgggagtctgtcaatgcaaacaactggtttttggca 100




>36184_der-mir-100:mirbase
          Length = 82

 Score =  163 bits (82), Expect = 3e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36782_dmo-mir-100:mirbase
          Length = 82

 Score =  163 bits (82), Expect = 3e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37144_dse-mir-100:mirbase
          Length = 82

 Score =  163 bits (82), Expect = 3e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37219_dsi-mir-100:mirbase
          Length = 82

 Score =  163 bits (82), Expect = 3e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37358_dvi-mir-100:mirbase
          Length = 82

 Score =  163 bits (82), Expect = 3e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37437_dwi-mir-100:mirbase
          Length = 82

 Score =  163 bits (82), Expect = 3e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37512_dya-mir-100:mirbase
          Length = 82

 Score =  163 bits (82), Expect = 3e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36106_dan-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 7e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36272_dgr-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 7e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36855_dpe-mir-100-1:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 7e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36856_dpe-mir-100-2:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 7e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60
          |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>25755_xtr-mir-100:mirbase
          Length = 76

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 11 aaacccgtaaatccgaacttgtgctgt 37
          ||||||||| |||||||||||||||||
Sbjct: 9  aaacccgtagatccgaacttgtgctgt 35




>35288_aga-mir-100:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 10 gaaacccgtaaatccgaacttgtgctg 36
          |||||||||| ||||||||||||||||
Sbjct: 13 gaaacccgtagatccgaacttgtgctg 39




>31827_mmu-mir-100:mirbase
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 aaacccgtaaatccgaacttgtgctg 36
          ||||||||| ||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtgctg 37




>32708_rno-mir-100:mirbase
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 aaacccgtaaatccgaacttgtgctg 36
          ||||||||| ||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtgctg 37




>33958_ssc-mir-100:mirbase
          Length = 80

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 aaacccgtaaatccgaacttgtgctg 36
          ||||||||| ||||||||||||||||
Sbjct: 15 aaacccgtagatccgaacttgtgctg 40




>26440_tgu-mir-100-1:mirbase
          Length = 111

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 aaacccgtaaatccgaacttgtgct 35
          ||||||||| |||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtgct 34




>26441_tgu-mir-100-2:mirbase
          Length = 111

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 aaacccgtaaatccgaacttgtgct 35
          ||||||||| |||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtgct 34




>35190_aae-mir-100:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 aacccgtaaatccgaacttgtgctg 36
          |||||||| ||||||||||||||||
Sbjct: 31 aacccgtagatccgaacttgtgctg 55




>36020_cqu-mir-100:mirbase
          Length = 110

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 aacccgtaaatccgaacttgtgctg 36
          |||||||| ||||||||||||||||
Sbjct: 23 aacccgtagatccgaacttgtgctg 47




>27501_age-mir-100:mirbase
          Length = 80

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
          ||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39




>27563_lla-mir-100:mirbase
          Length = 80

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
          ||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39




>27610_sla-mir-100:mirbase
          Length = 80

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
          ||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39