miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36391_dme-mir-137:mirbase
          Length = 91

 Score =  180 bits (91), Expect = 1e-46
 Identities = 91/91 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  caatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  caatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgct 60

                                         
Query: 61 tgagaatacacgtagttcaccgagatttgtt 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 tgagaatacacgtagttcaccgagatttgtt 91




>37223_dsi-mir-137:mirbase
          Length = 110

 Score =  180 bits (91), Expect = 1e-46
 Identities = 91/91 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   caatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12  caatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgct 71

                                          
Query: 61  tgagaatacacgtagttcaccgagatttgtt 91
           |||||||||||||||||||||||||||||||
Sbjct: 72  tgagaatacacgtagttcaccgagatttgtt 102




>36936_dps-mir-137:mirbase
          Length = 111

 Score =  103 bits (52), Expect = 2e-23
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                      
Query: 2  aatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgctt 61
          ||||| ||| |||||||||||| ||| |||||||||||||| |||| |||||||||||||
Sbjct: 13 aatcttcaacggccacgtgtatactcatagctataacctgatatccgaatgttattgctt 72

                          
Query: 62 gagaatacacgtagtt 77
          ||||||||||||||||
Sbjct: 73 gagaatacacgtagtt 88




>34825_spu-mir-137:mirbase
          Length = 72

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 50 atgttattgcttgagaatacacgtagt 76
          |||||||||||||||||||||||||||
Sbjct: 43 atgttattgcttgagaatacacgtagt 69




>35064_api-mir-137:mirbase
          Length = 82

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 49 tgttattgcttgagaatacacgtagtt 75




>35194_aae-mir-137-1:mirbase
          Length = 104

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 60 tgttattgcttgagaatacacgtagtt 86




>35195_aae-mir-137-2:mirbase
          Length = 103

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 62 tgttattgcttgagaatacacgtagtt 88




>35292_aga-mir-137:mirbase
          Length = 91

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 52 tgttattgcttgagaatacacgtagtt 78




>35370_ame-mir-137:mirbase
          Length = 100

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84




>36024_cqu-mir-137:mirbase
          Length = 91

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 50 tgttattgcttgagaatacacgtagtt 76




>37580_ngi-mir-137:mirbase
          Length = 83

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 47 tgttattgcttgagaatacacgtagtt 73




>37612_nlo-mir-137:mirbase
          Length = 83

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 47 tgttattgcttgagaatacacgtagtt 73




>37652_nvi-mir-137:mirbase
          Length = 100

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 tgttattgcttgagaatacacgtagtt 77
          |||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84




>38754_cte-mir-137:mirbase
          Length = 101

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 50 atgttattgcttgagaatacacgtag 75
          ||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82




>34881_sko-mir-137:mirbase
          Length = 101

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 50 atgttattgcttgagaatacacgtag 75
          ||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82




>35540_bmo-mir-137:mirbase
          Length = 90

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 50 atgttattgcttgagaatacacgtag 75
          ||||||||||||||||||||||||||
Sbjct: 52 atgttattgcttgagaatacacgtag 77




>37745_tca-mir-137:mirbase
          Length = 77

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 50 atgttattgcttgagaatacacgtag 75
          ||||||||||||||||||||||||||
Sbjct: 45 atgttattgcttgagaatacacgtag 70




>37746_tca-mir-137:mirbase
          Length = 77

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 50 atgttattgcttgagaatacacgtag 75
          ||||||||||||||||||||||||||
Sbjct: 45 atgttattgcttgagaatacacgtag 70




>38869_lgi-mir-137:mirbase
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 51 tgttattgcttgagaatacacgta 74
          ||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgta 81




>34747_tni-mir-137:mirbase
          Length = 70

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 50 atgttattgcttgagaatacacgtagt 76
          |||||||||||||||||||| ||||||
Sbjct: 40 atgttattgcttgagaatacgcgtagt 66




>34973_isc-mir-137:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 51 tgttattgcttgagaatacacgt 73
          |||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgt 80




>35013_dpu-mir-137:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 51 tgttattgcttgagaatacacgt 73
          |||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgt 80




>31494_oan-mir-137b:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 51 tgttattgcttgagaatacacgtagt 76
          ||||||||||||||||||| ||||||
Sbjct: 51 tgttattgcttgagaatacgcgtagt 76




>24683_bfl-mir-137:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 ttattgcttgagaatacacgt 73
          |||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80




>25489_pma-mir-137-1:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 51 tgttattgcttgagaatacacgtag 75
          ||||||||||| |||||||||||||
Sbjct: 51 tgttattgcttaagaatacacgtag 75




>25490_pma-mir-137-2:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 51 tgttattgcttgagaatacacgtag 75
          ||||||||||| |||||||||||||
Sbjct: 51 tgttattgcttaagaatacacgtag 75




>34952_xbo-mir-137:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 ttattgcttgagaatacacgt 73
          |||||||||||||||||||||
Sbjct: 53 ttattgcttgagaatacacgt 73




>38117_bma-mir-137:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 tgttattgcttgagaataca 70
          ||||||||||||||||||||
Sbjct: 53 tgttattgcttgagaataca 72