miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36434_dme-mir-285:mirbase
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaggagaacccactcaatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaggagaacccactcaatttaa 60
Query: 61 ctctagcaccattcgaaatcagtgcttttgataagaaac 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctagcaccattcgaaatcagtgcttttgataagaaac 99
>37242_dsi-mir-285:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaggagaacccactcaatttaa 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaggaaaacccactcaattcaa 60
Query: 61 ctctagcaccattcgaaatcagtgcttttgataagaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctagcaccattcgaaatcagtgcttttgataagaaa 98
>37166_dse-mir-285:mirbase
Length = 98
Score = 172 bits (87), Expect = 3e-44
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 4 aatcgaagaactgagatcgattggtgcatagatatcaggagaacccactcaatttaactc 63
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 4 aatcgaagaactgagatcgattggtgcatagatatcaggaaaacccactcaattcaactc 63
Query: 64 tagcaccattcgaaatcagtgcttttgataagaaa 98
|||||||||||||||||||||||||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgcttttgataagaaa 98
>37535_dya-mir-285:mirbase
Length = 98
Score = 170 bits (86), Expect = 1e-43
Identities = 95/98 (96%)
Strand = Plus / Plus
Query: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaggagaacccactcaatttaa 60
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaagacaacccactcaattcaa 60
Query: 61 ctctagcaccattcgaaatcagtgcttttgataagaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctagcaccattcgaaatcagtgcttttgataagaaa 98
>36206_der-mir-285:mirbase
Length = 98
Score = 147 bits (74), Expect = 2e-36
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaggagaacccactcaatttaa 60
|||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 1 tcgagtcgaagaactgagatcgattggtgcatagatatcaagaagccccactcaattcaa 60
Query: 61 ctctagcaccattcgaaatcagtgcttttgataagaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctagcaccattcgaaatcagtgcttttgataagaaa 98
>36960_dps-mir-285:mirbase
Length = 100
Score = 123 bits (62), Expect = 3e-29
Identities = 90/98 (91%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaggagaacccactcaattt-a 59
|||||||||||||||||||||||||||||||||||||||| ||| || | || | ||| |
Sbjct: 1 tcgaatcgaagaactgagatcgattggtgcatagatatcaagaggactcgctaattttca 60
Query: 60 actctagcaccattcgaaatcagtgcttttgataagaa 97
||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 actctagcaccattcgaaatcagtgcttttgatgagaa 98
>36128_dan-mir-285:mirbase
Length = 98
Score = 115 bits (58), Expect = 6e-27
Identities = 90/98 (91%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 1 tcgaatcgaagaactgagatcgattggtgcatagatatc-aggagaacccactcaattta 59
||||||| ||||||||||||||||||||||||||||||| |||||| || | ||| || |
Sbjct: 1 tcgaatcaaagaactgagatcgattggtgcatagatatcaaggagatccga-tcatttca 59
Query: 60 actctagcaccattcgaaatcagtgcttttgataagaa 97
| ||||||||||||||||||||||||||||||||||||
Sbjct: 60 attctagcaccattcgaaatcagtgcttttgataagaa 97
>36295_dgr-mir-285:mirbase
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 8 gaagaactgagatcgattggtgcatagatatc 39
||||||||||||||||||||||||||||||||
Sbjct: 8 gaagaactgagatcgattggtgcatagatatc 39
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 tctagcaccattcgaaatcagtgcttt 88
|||||||||||||||||||||||||||
Sbjct: 64 tctagcaccattcgaaatcagtgcttt 90
>37380_dvi-mir-285:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 8 gaagaactgagatcgattggtgcatagatatc 39
||||||||||||||||||||||||||||||||
Sbjct: 8 gaagaactgagatcgattggtgcatagatatc 39
>36803_dmo-mir-285:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 8 gaagaactgagatcgattggtgcatagata 37
||||||||||||||||||||||||||||||
Sbjct: 8 gaagaactgagatcgattggtgcatagata 37
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 62 tctagcaccattcgaaatcagtgctttt 89
||||||||||||||||||||||||||||
Sbjct: 65 tctagcaccattcgaaatcagtgctttt 92
>37459_dwi-mir-285:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 tctagcaccattcgaaatcagtgctt 87
||||||||||||||||||||||||||
Sbjct: 59 tctagcaccattcgaaatcagtgctt 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 actgagatcgattggtgcatagata 37
|||||||||||||||||||||||||
Sbjct: 1 actgagatcgattggtgcatagata 25
>35214_aae-mir-285:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 actctagcaccattcgaaatcagt 83
||||||||||||||||||||||||
Sbjct: 53 actctagcaccattcgaaatcagt 76
>24655_bfl-mir-29b:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 tctagcaccattcgaaatcagtgcttt 88
|||||||||||| ||||||||||||||
Sbjct: 60 tctagcaccatttgaaatcagtgcttt 86
>36040_cqu-mir-285:mirbase
Length = 67
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 61 ctctagcaccattcgaaatcagt 83
|||||||||||||||||||||||
Sbjct: 43 ctctagcaccattcgaaatcagt 65
>35560_bmo-mir-285:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 ctctagcaccattcgaaatcagtgct 86
||||||||||||||||| ||||||||
Sbjct: 52 ctctagcaccattcgaattcagtgct 77
>38736_cte-mir-29b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tagcaccattcgaaatcagtgctt 87
|||||||||| |||||||||||||
Sbjct: 61 tagcaccatttgaaatcagtgctt 84
