miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36436_dme-mir-286:mirbase
Length = 100
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
Query: 61 gaagtgactagaccgaacactcgtgctataattttaaaat 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtgactagaccgaacactcgtgctataattttaaaat 100
>37243_dsi-mir-286:mirbase
Length = 100
Score = 174 bits (88), Expect = 8e-45
Identities = 98/100 (98%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttc-aaagaaaggtttcgattaag 59
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
Query: 60 cgaagtgactagaccgaacactcgtgctataattttaaaa 99
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaagtgactagaccgaacactcgtgctataattttaaaa 100
>37167_dse-mir-286:mirbase
Length = 99
Score = 172 bits (87), Expect = 3e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaataaaggtttcgatcaagc 60
Query: 61 gaagtgactagaccgaacactcgtgctataattttaaaa 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtgactagaccgaacactcgtgctataattttaaaa 99
>36207_der-mir-286:mirbase
Length = 98
Score = 165 bits (83), Expect = 7e-42
Identities = 96/99 (96%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaa-ggtttcgatcgagc 59
Query: 61 gaagtgactagaccgaacactcgtgctataattttaaaa 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gaagtgactagaccgaacactcgtgctataattttaaaa 98
>37536_dya-mir-286:mirbase
Length = 98
Score = 165 bits (83), Expect = 7e-42
Identities = 96/99 (96%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa-agaggtttcgatcaagc 59
Query: 61 gaagtgactagaccgaacactcgtgctataattttaaaa 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gaagtgactagaccgaacactcgtgctataattttaaaa 98
>36129_dan-mir-286:mirbase
Length = 103
Score = 107 bits (54), Expect = 2e-24
Identities = 91/103 (88%), Gaps = 4/103 (3%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaa----ggtttcgatt 56
||||||||||||||||| ||||||||||||| |||||||| | ||| |||| | |
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttcacaaaaaaattggttaccaac 60
Query: 57 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 99
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
>36880_dpe-mir-286:mirbase
Length = 96
Score = 91.7 bits (46), Expect = 9e-20
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
|||||||| |||||||| ||||||| ||||| |||||| || |||| |||| ||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag---ggttccgatcaagc 57
Query: 61 gaagtgactagaccgaacactcgtgctataatttta 96
||||||||||||||||||||||||||||||||||||
Sbjct: 58 gaagtgactagaccgaacactcgtgctataatttta 93
>36961_dps-mir-286:mirbase
Length = 97
Score = 91.7 bits (46), Expect = 9e-20
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
|||||||| |||||||| ||||||| ||||| |||||| || |||| |||| ||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag---ggttccgatcaagc 57
Query: 61 gaagtgactagaccgaacactcgtgctataatttta 96
||||||||||||||||||||||||||||||||||||
Sbjct: 58 gaagtgactagaccgaacactcgtgctataatttta 93
>36296_dgr-mir-286-1:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36297_dgr-mir-286-2:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36804_dmo-mir-286:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaa 41
|||||||| |||||||| |||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctctttttcaa 41
>37381_dvi-mir-286:mirbase
Length = 101
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa 42
|||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttcaaa 42
>37460_dwi-mir-286:mirbase
Length = 108
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 62 aagtgactagaccgaacactcgtgctataattttaa 97
||||||||||||||||||||||||||||||||||||
Sbjct: 73 aagtgactagaccgaacactcgtgctataattttaa 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 3 aaaattgaatggcgaatgtcggtatggtctctttttc 39
||||||||||||||| ||||||||| |||||||||||
Sbjct: 1 aaaattgaatggcgattgtcggtatagtctctttttc 37
>35216_aae-mir-286b-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 agtgactagaccgaacactcgt 84
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35217_aae-mir-286b-2:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 agtgactagaccgaacactcgt 84
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35215_aae-mir-286a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 agtgactagaccgaacactcg 83
|||||||||||||||||||||
Sbjct: 61 agtgactagaccgaacactcg 81
>35308_aga-mir-286:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 agtgactagaccgaacactcg 83
|||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcg 79
