miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37170_dse-mir-289:mirbase
Length = 96
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 2 agtttacagtaaaataaatatttaagtggagcctgcgacttcagtccctctgactgactg 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
Query: 62 gggtaagtcacttgagcgtttgttggcacgtaaaag 97
||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
>37246_dsi-mir-289:mirbase
Length = 96
Score = 182 bits (92), Expect = 3e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 2 agtttacagtaaaataaatatttaagtggagcctgcgacttcagtccctctgactgactg 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
Query: 62 gggtaagtcacttgagcgtttgttggcacgtaaaag 97
||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
>36210_der-mir-289:mirbase
Length = 96
Score = 167 bits (84), Expect = 2e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 2 agtttacagtaaaataaatatttaagtggagcctgcgacttcagtccctctgactgactg 61
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgacggactg 60
Query: 62 gggtaagtcacttgagcgtttgttggcacgtaaaag 97
|||||| |||||||||||||||||||||||||||||
Sbjct: 61 gggtaactcacttgagcgtttgttggcacgtaaaag 96
>37539_dya-mir-289:mirbase
Length = 96
Score = 167 bits (84), Expect = 2e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 2 agtttacagtaaaataaatatttaagtggagcctgcgacttcagtccctctgactgactg 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
Query: 62 gggtaagtcacttgagcgtttgttggcacgtaaaag 97
||||||||| || |||||||||||||||||||||||
Sbjct: 61 gggtaagtctctcgagcgtttgttggcacgtaaaag 96
>36964_dps-mir-289:mirbase
Length = 100
Score = 95.6 bits (48), Expect = 6e-21
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 gagtttacagtaaaataaatatttaagtggagcctgcgact-tcagtccctctgactgac 59
||||||||||| ||||||||||||||||||||||||||||| | ||| || | |||
Sbjct: 1 gagtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgac 60
Query: 60 tggggtaagtcacttgagcgtttgttggcacgtaaaagac 99
|||| ||| |||||||||||||||||||||||||||||||
Sbjct: 61 tgggctaactcacttgagcgtttgttggcacgtaaaagac 100
>36883_dpe-mir-289:mirbase
Length = 97
Score = 89.7 bits (45), Expect = 4e-19
Identities = 85/97 (87%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 2 agtttacagtaaaataaatatttaagtggagcctgcgact-tcagtccctctgactgact 60
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 1 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 60
Query: 61 ggggtaagtcacttgagcgtttgttggcacgtaaaag 97
||| ||| |||||||||||||||||||||||||||||
Sbjct: 61 gggctaactcacttgagcgtttgttggcacgtaaaag 97
>36132_dan-mir-289:mirbase
Length = 117
Score = 81.8 bits (41), Expect = 9e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 gagtttacagtaaaataaatatttaagtggagcctgcgact 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtttacagtaaaataaatatttaagtggagcctgcgact 41
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 67 agtcacttgagcgtttgttggcacgtaaaagac 99
|||||||||||||||||||||||||||||||||
Sbjct: 85 agtcacttgagcgtttgttggcacgtaaaagac 117
