miRNEST 2.0, an integrative microRNA resource :: BLAST
>42807_zma-MIR396a:mirbase
Length = 137
Score = 248 bits (125), Expect = 1e-66
Identities = 134/137 (97%)
Strand = Plus / Plus
Query: 9 acatggccctccttgccgtctcccacagctttcttgaactgcatgccgccggctggtgga 68
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatggccctccttgccgtcttccacagctttcttgaactgcatgccgccggctggtgga 60
Query: 69 tgctgcgcgctgaaattccggtcgatcccaagaggcgcagttcaataaagctgtgggaaa 128
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctgcgcgcttgaattccggtcgatcccaagaggcgcagttcaataaagctgtgggaaa 120
Query: 129 ctgcagagagaggccac 145
|||||||||||||||||
Sbjct: 121 ctgcagagagaggccac 137
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 83.8 bits (42), Expect = 3e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 9 acatggccctccttgccgtctcccacagctttcttgaactgcatgc 54
||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 acatggccctccttgccgtcttccacagctttcttgaactgcatgc 46
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtgggaaactgcagagagag 140
|||||||||||||||||||||||| |||||||||||
Sbjct: 85 gcagttcaataaagctgtgggaaattgcagagagag 120
>42808_zma-MIR396b:mirbase
Length = 136
Score = 79.8 bits (40), Expect = 5e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtgggaaactgcagagagaggcca 144
||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 gcagttcaataaagctgtgggaaactgcagagagaggcca 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 23 ccacagctttcttgaactgcat 44
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 29 tcccacagctttcttgaactgcatgc 54
|||||||||||| |||||||||||||
Sbjct: 117 tcccacagctttattgaactgcatgc 92
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 79.8 bits (40), Expect = 5e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtgggaaactgcagagagaggcca 144
||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gcagttcaataaagctgtgggaaactgcagagagaggcca 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 23 ccacagctttcttgaactgcat 44
>42461_sof-MIR396:mirbase
Length = 134
Score = 79.8 bits (40), Expect = 5e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtgggaaactgcagagagaggcca 144
||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcagttcaataaagctgtgggaaactgcagagagaggcca 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 23 ccacagctttcttgaactgcat 44
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtgggaaactgcagagagaggcca 144
|||||||||||||||||||||||| | |||||||||||||
Sbjct: 99 gcagttcaataaagctgtgggaaatttcagagagaggcca 138
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgc 50
||||||||||||||||||||
Sbjct: 35 ccacagctttcttgaactgc 54
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaaactgcagagagag 140
||||||||||||||||||||| |||||||||||
Sbjct: 101 gttcaataaagctgtgggaaattgcagagagag 133
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 10 catggccctccttgccgtctcccacagctttcttgaactgcat 52
|||||||||| |||| ||| ||||||||||||||||||||||
Sbjct: 14 catggccctctttgctatcttccacagctttcttgaactgcat 56
>42026_osa-MIR396a:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtgggaaactgcagag 136
|||||||||||||||||||||||| |||||||
Sbjct: 123 gcagttcaataaagctgtgggaaattgcagag 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgca 51
|||||||||||||||||||||
Sbjct: 13 ccacagctttcttgaactgca 33
>42027_osa-MIR396b:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtgggaaa 128
||||||||||||||||||||||||
Sbjct: 85 gcagttcaataaagctgtgggaaa 108
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 26 gtctcccacagctttcttgaactgcat 52
|||| ||||||||||||||||||||||
Sbjct: 8 gtcttccacagctttcttgaactgcat 34
>42814_zma-MIR396h:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 105 gcagttcaataaagctgtgggaa 127
|||||||||||||||||||||||
Sbjct: 23 gcagttcaataaagctgtgggaa 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 29 tcccacagctttcttgaactgcatgc 54
|||||||||||| |||||||||||||
Sbjct: 2 tcccacagctttattgaactgcatgc 27
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 96 ccacagctttcttgaactgcat 75
>42813_zma-MIR396g:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 105 gcagttcaataaagctgtgggaa 127
|||||||||||||||||||||||
Sbjct: 23 gcagttcaataaagctgtgggaa 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 109 ccacagctttcttgaactgcat 88
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcatg 53
|||||||||||||||||||||||
Sbjct: 3 ccacagctttcttgaactgcatg 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaaa 128
|||||||||||||||||||||
Sbjct: 102 gttcaataaagctgtgggaaa 122
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtgggaa 127
|||||||||||||||||||||||
Sbjct: 110 gcagttcaataaagctgtgggaa 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 9 acatggccctccttgccgtctcccacagctttcttgaactgc 50
||||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 1 acatggccctctttgtattcttccacagctttcttgaactgc 42
>42472_ssp-MIR396:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 3 ccacagctttcttgaactgcat 24
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 105 gcagttcaataaagctgtggga 126
||||||||||||||||||||||
Sbjct: 74 gcagttcaataaagctgtggga 95
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 13 ccacagctttcttgaactgcat 34
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 90 gttcaataaagctgtgggaa 109
>41242_csi-MIR396b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 22 ccacagctttcttgaactgcat 43
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 87 gttcaataaagctgtgggaa 106
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 8 ccacagctttcttgaactgcat 29
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 72 gttcaataaagctgtgggaa 91
>40646_lja-MIR396:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 18 ccacagctttcttgaactgcat 39
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 76 gttcaataaagctgtgggaa 95
>40473_gma-MIR396a:mirbase
Length = 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgcat 52
||||||||||||||||||||||
Sbjct: 23 ccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 103 gttcaataaagctgtgggaa 122
>40379_rco-MIR396:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 27 tctcccacagctttcttgaact 48
||||||||||||||||||||||
Sbjct: 119 tctcccacagctttcttgaact 98
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgca 51
|||||||||||||||||||||
Sbjct: 13 ccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 106 gttcaataaagctgtgggaa 125
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgca 51
|||||||||||||||||||||
Sbjct: 13 ccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 97 gttcaataaagctgtgggaa 116
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgca 51
|||||||||||||||||||||
Sbjct: 13 ccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 107 gttcaataaagctgtgggaa 126
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgca 51
|||||||||||||||||||||
Sbjct: 13 ccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 107 gttcaataaagctgtgggaa 126
>40085_ath-MIR396a:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgca 51
|||||||||||||||||||||
Sbjct: 13 ccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 123 gttcaataaagctgtgggaa 142
>39877_aly-MIR396a:mirbase
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ccacagctttcttgaactgca 51
|||||||||||||||||||||
Sbjct: 26 ccacagctttcttgaactgca 46
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 gttcaataaagctgtgggaa 127
||||||||||||||||||||
Sbjct: 133 gttcaataaagctgtgggaa 152
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 29 tcccacagctttcttgaact 48
||||||||||||||||||||
Sbjct: 97 tcccacagctttcttgaact 78
>39741_smo-MIR396:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 29 tcccacagctttcttgaact 48
||||||||||||||||||||
Sbjct: 155 tcccacagctttcttgaact 136
