miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36451_dme-mir-307b:mirbase
Length = 120
Score = 238 bits (120), Expect = 8e-64
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 1 tagtttcgtggatactctgtcctgctatcgctcactcaaggaggttgtgatggataccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagtttcgtggatactctgtcctgctatcgctcactcaaggaggttgtgatggataccat 60
Query: 61 atcgaaataacatcacacccaggttgagtgagtcaaagcaagacaaaatgctgctaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcgaaataacatcacacccaggttgagtgagtcaaagcaagacaaaatgctgctaactt 120
>36136_dan-mir-307:mirbase
Length = 88
Score = 174 bits (88), Expect = 1e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 18 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 29
Query: 78 cccaggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||||
Sbjct: 28 cccaggttgagtgagtcaaagcaagaca 1
>36214_der-mir-307:mirbase
Length = 88
Score = 174 bits (88), Expect = 1e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 18 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 29
Query: 78 cccaggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||||
Sbjct: 28 cccaggttgagtgagtcaaagcaagaca 1
>36449_dme-mir-307a:mirbase
Length = 88
Score = 174 bits (88), Expect = 1e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 18 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 29
Query: 78 cccaggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||||
Sbjct: 28 cccaggttgagtgagtcaaagcaagaca 1
>36450_dme-mir-307a:mirbase
Length = 88
Score = 174 bits (88), Expect = 1e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 18 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 29
Query: 78 cccaggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||||
Sbjct: 28 cccaggttgagtgagtcaaagcaagaca 1
>37174_dse-mir-307:mirbase
Length = 88
Score = 174 bits (88), Expect = 1e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 18 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 29
Query: 78 cccaggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||||
Sbjct: 28 cccaggttgagtgagtcaaagcaagaca 1
>37250_dsi-mir-307:mirbase
Length = 88
Score = 174 bits (88), Expect = 1e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 18 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 29
Query: 78 cccaggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||||
Sbjct: 28 cccaggttgagtgagtcaaagcaagaca 1
>37543_dya-mir-307:mirbase
Length = 88
Score = 174 bits (88), Expect = 1e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 18 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgtcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcaca 29
Query: 78 cccaggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||||
Sbjct: 28 cccaggttgagtgagtcaaagcaagaca 1
>36886_dpe-mir-307:mirbase
Length = 88
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Minus
Query: 20 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 27
Query: 80 caggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||
Sbjct: 26 caggttgagtgagtcaaagcaagaca 1
>36968_dps-mir-307a:mirbase
Length = 88
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Minus
Query: 20 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 27
Query: 80 caggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||
Sbjct: 26 caggttgagtgagtcaaagcaagaca 1
>36969_dps-mir-307b:mirbase
Length = 85
Score = 168 bits (85), Expect = 6e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 20 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 60
Query: 80 caggttgagtgagtcaaagcaagac 104
|||||||||||||||||||||||||
Sbjct: 61 caggttgagtgagtcaaagcaagac 85
>36304_dgr-mir-307:mirbase
Length = 88
Score = 163 bits (82), Expect = 4e-41
Identities = 85/86 (98%)
Strand = Plus / Minus
Query: 20 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 79
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 86 tcctgctatcgctcactcaaggaggttgtgatggataccaaatcgaaataacatcacacc 27
Query: 80 caggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||
Sbjct: 26 caggttgagtgagtcaaagcaagaca 1
>36810_dmo-mir-307:mirbase
Length = 88
Score = 155 bits (78), Expect = 9e-39
Identities = 84/86 (97%)
Strand = Plus / Minus
Query: 20 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 79
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 86 tcctgctatcgctcactcaaggaggttgtgatggataccgaatcgaaataacatcacacc 27
Query: 80 caggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||
Sbjct: 26 caggttgagtgagtcaaagcaagaca 1
>37387_dvi-mir-307:mirbase
Length = 88
Score = 155 bits (78), Expect = 9e-39
Identities = 84/86 (97%)
Strand = Plus / Minus
Query: 20 tcctgctatcgctcactcaaggaggttgtgatggataccatatcgaaataacatcacacc 79
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 86 tcctgctatcgctcactcaaggaggttgtgatggataccaaatcgaactaacatcacacc 27
Query: 80 caggttgagtgagtcaaagcaagaca 105
||||||||||||||||||||||||||
Sbjct: 26 caggttgagtgagtcaaagcaagaca 1
>37467_dwi-mir-307:mirbase
Length = 87
Score = 135 bits (68), Expect = 8e-33
Identities = 81/84 (96%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 20 tcctgctatcgctcactcaaggaggttgtgatggataccata-tcgaaataacatcacac 78
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 86 tcctgctatcgctcactcaaggaggttgtgatggataccatattataaataacatcacac 27
Query: 79 ccaggttgagtgagtcaaagcaag 102
||||||||||||||||||||||||
Sbjct: 26 ccaggttgagtgagtcaaagcaag 3
>35564_bmo-mir-307:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 27 atcgctcactcaaggaggttgtgatgg 53
|||||||||||||||||||||||||||
Sbjct: 84 atcgctcactcaaggaggttgtgatgg 58
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 acatcacacccaggttgagtgagt 93
||||||||||||||||||||||||
Sbjct: 39 acatcacacccaggttgagtgagt 16
>37790_tca-mir-307:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 70 acatcacacccaggttgagtgagtca 95
||||||||||||||||||||||||||
Sbjct: 28 acatcacacccaggttgagtgagtca 3
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 28 tcgctcactcaaggaggttgtgatgg 53
||||||||||||||||||||||||||
Sbjct: 64 tcgctcactcaaggaggttgtgatgg 39
>37791_tca-mir-307:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 70 acatcacacccaggttgagtgagtca 95
||||||||||||||||||||||||||
Sbjct: 28 acatcacacccaggttgagtgagtca 3
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 28 tcgctcactcaaggaggttgtgatgg 53
||||||||||||||||||||||||||
Sbjct: 64 tcgctcactcaaggaggttgtgatgg 39
>35220_aae-mir-307:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 28 tcgctcactcaaggaggttgtgatg 52
|||||||||||||||||||||||||
Sbjct: 80 tcgctcactcaaggaggttgtgatg 56
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 71 catcacacccaggttgagtgagt 93
|||||||||||||||||||||||
Sbjct: 44 catcacacccaggttgagtgagt 22
>35311_aga-mir-307:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 28 tcgctcactcaaggaggttgtgatg 52
|||||||||||||||||||||||||
Sbjct: 78 tcgctcactcaaggaggttgtgatg 54
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 71 catcacacccaggttgagtgagt 93
|||||||||||||||||||||||
Sbjct: 42 catcacacccaggttgagtgagt 20
>35391_ame-mir-307:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 71 catcacacccaggttgagtgagtc 94
||||||||||||||||||||||||
Sbjct: 54 catcacacccaggttgagtgagtc 31
>37567_lmi-mir-307:mirbase
Length = 61
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 acatcacacccaggttgagtgagt 93
||||||||||||||||||||||||
Sbjct: 24 acatcacacccaggttgagtgagt 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 28 tcgctcactcaaggaggttgtga 50
|||||||||||||||||||||||
Sbjct: 61 tcgctcactcaaggaggttgtga 39
>34985_isc-mir-307:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 ctcactcaaggaggttgtgatgg 53
|||||||||||||||||||||||
Sbjct: 80 ctcactcaaggaggttgtgatgg 58
>37667_nvi-mir-307:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 71 catcacacccaggttgagtgagt 93
|||||||||||||||||||||||
Sbjct: 42 catcacacccaggttgagtgagt 20
>35083_api-mir-307-1:mirbase
Length = 61
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 28 tcgctcactcaaggaggttgtg 49
||||||||||||||||||||||
Sbjct: 61 tcgctcactcaaggaggttgtg 40
>35084_api-mir-307-2:mirbase
Length = 61
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 28 tcgctcactcaaggaggttgtg 49
||||||||||||||||||||||
Sbjct: 61 tcgctcactcaaggaggttgtg 40
>35030_dpu-mir-307:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 ctcactcaaggaggttgtga 50
||||||||||||||||||||
Sbjct: 80 ctcactcaaggaggttgtga 61
