miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36463_dme-mir-313:mirbase
Length = 71
Score = 99.6 bits (50), Expect = 2e-22
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 attttctgctgcggatgggggcagtactgnnnnnnnaacattgagtattgcacttttcac 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 attttctgctgcggatgggggcagtactgtttttttaacattgagtattgcacttttcac 60
Query: 61 agcccgaaaat 71
|||||||||||
Sbjct: 61 agcccgaaaat 71
>37180_dse-mir-313:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 attgagtattgcacttttcacagcc 64
|||||||||||||||||||||||||
Sbjct: 37 attgagtattgcacttttcacagcc 61
>37256_dsi-mir-313:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 attgagtattgcacttttcacagcc 64
|||||||||||||||||||||||||
Sbjct: 37 attgagtattgcacttttcacagcc 61
>36813_dmo-mir-313:mirbase
Length = 66
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 44 agtattgcacttttcacagcccgaaaa 70
||||||||||||||||| ||| |||||
Sbjct: 40 agtattgcacttttcacggccggaaaa 66
>37391_dvi-mir-313:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 44 agtattgcacttttcacagcccgaaaa 70
||||||||||||||||| ||| |||||
Sbjct: 45 agtattgcacttttcacggccggaaaa 71
