miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36466_dme-mir-314:mirbase
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36225_der-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37181_dse-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37257_dsi-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37550_dya-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaaccccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37470_dwi-mir-314:mirbase
Length = 90
Score = 131 bits (66), Expect = 9e-32
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||| | | |||| |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaattcaatgttggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36889_dpe-mir-314:mirbase
Length = 89
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||||||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89
>36973_dps-mir-314:mirbase
Length = 89
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||||||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89
>36143_dan-mir-314:mirbase
Length = 88
Score = 109 bits (55), Expect = 3e-25
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||||| || | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatc--agtttggattttgt 58
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 59 tacctctggtattcgagccaataagttcgg 88
>37392_dvi-mir-314:mirbase
Length = 91
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 52 ggattttgttacctctggtattcgagccaataagttcgg 90
|||||||||| ||| ||||||||||||||||||||||||
Sbjct: 53 ggattttgttgcctttggtattcgagccaataagttcgg 91
>36814_dmo-mir-314:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 tggtattcgagccaataagttcgg 90
||||||||||||||||||||||||
Sbjct: 72 tggtattcgagccaataagttcgg 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaa 22
||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaa 22
>36308_dgr-mir-314:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 ggtattcgagccaataagttcgg 90
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaa 22
||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaa 22
