miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36466_dme-mir-314:mirbase
          Length = 90

 Score =  178 bits (90), Expect = 4e-46
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90




>36225_der-mir-314:mirbase
          Length = 90

 Score =  147 bits (74), Expect = 2e-36
 Identities = 86/90 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90




>37181_dse-mir-314:mirbase
          Length = 90

 Score =  147 bits (74), Expect = 2e-36
 Identities = 86/90 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90




>37257_dsi-mir-314:mirbase
          Length = 90

 Score =  147 bits (74), Expect = 2e-36
 Identities = 86/90 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90




>37550_dya-mir-314:mirbase
          Length = 90

 Score =  147 bits (74), Expect = 2e-36
 Identities = 86/90 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||  |||||||||||||||||  |||||||||||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaaccccatgtcggattttgt 60

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90




>37470_dwi-mir-314:mirbase
          Length = 90

 Score =  131 bits (66), Expect = 9e-32
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||  ||||||||||||||||| | | |||| |||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaattcaatgttggattttgt 60

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90




>36889_dpe-mir-314:mirbase
          Length = 89

 Score =  123 bits (62), Expect = 2e-29
 Identities = 84/90 (93%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||  ||||||||||||||||||||| |  | |||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89




>36973_dps-mir-314:mirbase
          Length = 89

 Score =  123 bits (62), Expect = 2e-29
 Identities = 84/90 (93%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||  ||||||||||||||||||||| |  | |||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89




>36143_dan-mir-314:mirbase
          Length = 88

 Score =  109 bits (55), Expect = 3e-25
 Identities = 82/90 (91%), Gaps = 2/90 (2%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
          ||||||||||||||||||||||  ||||||||||||||||| ||  |  | |||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatc--agtttggattttgt 58

                                        
Query: 61 tacctctggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||||||||
Sbjct: 59 tacctctggtattcgagccaataagttcgg 88




>37392_dvi-mir-314:mirbase
          Length = 91

 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                 
Query: 52 ggattttgttacctctggtattcgagccaataagttcgg 90
          |||||||||| ||| ||||||||||||||||||||||||
Sbjct: 53 ggattttgttgcctttggtattcgagccaataagttcgg 91




>36814_dmo-mir-314:mirbase
          Length = 95

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 67 tggtattcgagccaataagttcgg 90
          ||||||||||||||||||||||||
Sbjct: 72 tggtattcgagccaataagttcgg 95



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgtaacttgtgtggcttcgaa 22
          ||||||||||||||||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaa 22




>36308_dgr-mir-314:mirbase
          Length = 76

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 68 ggtattcgagccaataagttcgg 90
          |||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgtaacttgtgtggcttcgaa 22
          ||||||||||||||||||||||
Sbjct: 1  tcgtaacttgtgtggcttcgaa 22