miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36482_dme-mir-932:mirbase
          Length = 91

 Score =  180 bits (91), Expect = 1e-46
 Identities = 91/91 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ttggttttgaagttttcaattccgtagtgcattgcagtgtgtttcattatttactgcaag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ttggttttgaagttttcaattccgtagtgcattgcagtgtgtttcattatttactgcaag 60

                                         
Query: 61 cgctgcggatttggcaactttgacgaccttc 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 cgctgcggatttggcaactttgacgaccttc 91




>37265_dsi-mir-932:mirbase
          Length = 100

 Score =  172 bits (87), Expect = 3e-44
 Identities = 90/91 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ttggttttgaagttttcaattccgtagtgcattgcagtgtgtttcattatttactgcaag 60
          |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 6  ttggttttgaagttttcaattccgtagtgcattgcagtgtgtttaattatttactgcaag 65

                                         
Query: 61 cgctgcggatttggcaactttgacgaccttc 91
          |||||||||||||||||||||||||||||||
Sbjct: 66 cgctgcggatttggcaactttgacgaccttc 96




>35233_aae-mir-932:mirbase
          Length = 95

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 15 ttcaattccgtagtgcattgcagtgtg 41
          |||||||||||||||||||||||||||
Sbjct: 17 ttcaattccgtagtgcattgcagtgtg 43




>36049_cqu-mir-932:mirbase
          Length = 65

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 ttcaattccgtagtgcattgcagtgt 40
          ||||||||||||||||||||||||||
Sbjct: 3  ttcaattccgtagtgcattgcagtgt 28




>37811_tca-mir-932:mirbase
          Length = 84

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 ttcaattccgtagtgcattgcagtgt 40
          ||||||||||||||||||||||||||
Sbjct: 13 ttcaattccgtagtgcattgcagtgt 38




>37812_tca-mir-932:mirbase
          Length = 84

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 ttcaattccgtagtgcattgcagtgt 40
          ||||||||||||||||||||||||||
Sbjct: 13 ttcaattccgtagtgcattgcagtgt 38




>35573_bmo-mir-932:mirbase
          Length = 89

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 15 ttcaattccgtagtgcattgcagtg 39
          |||||||||||||||||||||||||
Sbjct: 11 ttcaattccgtagtgcattgcagtg 35




>37596_ngi-mir-932:mirbase
          Length = 88

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 15 ttcaattccgtagtgcattgcagt 38
          ||||||||||||||||||||||||
Sbjct: 12 ttcaattccgtagtgcattgcagt 35




>37626_nlo-mir-932:mirbase
          Length = 88

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 15 ttcaattccgtagtgcattgcagt 38
          ||||||||||||||||||||||||
Sbjct: 12 ttcaattccgtagtgcattgcagt 35




>37674_nvi-mir-932:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 15 ttcaattccgtagtgcattgcagt 38
          ||||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcagt 38




>35402_ame-mir-932:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 ttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcag 37




>36981_dps-mir-932:mirbase
          Length = 118

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 tcaattccgtagtgcattgcagt 38
          |||||||||||||||||||||||
Sbjct: 29 tcaattccgtagtgcattgcagt 51