miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36494_dme-mir-959:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttaactttgttctatattcttagtactcgggttgataaagaccttttcttcagggagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaactttgttctatattcttagtactcgggttgataaagaccttttcttcagggagcct 60
Query: 61 ttgtcatcgggggtattatgaaatatagtttaaagaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtcatcgggggtattatgaaatatagtttaaagaaa 98
>37269_dsi-mir-959:mirbase
Length = 92
Score = 159 bits (80), Expect = 5e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 5 ctttgttctatattcttagtactcgggttgataaagaccttttcttcagggagcctttgt 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ctttgttctatattcttagtactcgggttgataaagaccttttctttgcggagcctttgt 60
Query: 65 catcgggggtattatgaaatatagtttaaaga 96
||||||||||||||||||||||||||||||||
Sbjct: 61 catcgggggtattatgaaatatagtttaaaga 92
>36984_dps-mir-959:mirbase
Length = 112
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 9 gttctatattcttagtactcgggttgataaagacc 43
||||||| ||||||||||| |||||||||||||||
Sbjct: 11 gttctatgttcttagtacttgggttgataaagacc 45
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 56 agcctttgtcatcgggggtattatg 80
|||||||||||||| ||||||||||
Sbjct: 61 agcctttgtcatcgcgggtattatg 85
