miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36499_dme-mir-962:mirbase
          Length = 92

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gatggggcactcaggctataaggtagagaaattgatgctgtctacactattcagacttca 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gatggggcactcaggctataaggtagagaaattgatgctgtctacactattcagacttca 60

                                          
Query: 61 gtttcattacctttcaatttgtttgcccccat 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 gtttcattacctttcaatttgtttgcccccat 92




>37272_dsi-mir-962:mirbase
          Length = 120

 Score =  155 bits (78), Expect = 7e-39
 Identities = 87/90 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatggggcactcaggctataaggtagagaaattgatgctgtctacactattcagacttca 60
           |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 15  gatggggcgctcaggctataaggtagagaaattgatgttgtctacactattcagacttca 74

                                         
Query: 61  gtttcattacctttcaatttgtttgccccc 90
           |||||||| |||||||||||||||||||||
Sbjct: 75  gtttcattgcctttcaatttgtttgccccc 104