miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37354_dvi-mir-79:mirbase
Length = 92
Score = 141 bits (71), Expect = 8e-35
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 2 tgccgttgctttggcgctttagctgtatgatagatttaaatacttcataaagctagatta 61
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10 tgccgttgctttggcgctttagctgtatgatagatttgaatacttcataaagctagatta 69
Query: 62 ccaaagcattggctc 76
|||||||||||||||
Sbjct: 70 ccaaagcattggctc 84
>36102_dan-mir-79:mirbase
Length = 91
Score = 135 bits (68), Expect = 5e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 8 tgctttggcgctttagctgtatgatagatttaaatacttcataaagctagattaccaaag 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tgctttggcgctttagctgtatgatagatttaaatacttcataaagctagattaccaaag 74
Query: 68 cattggct 75
||||||||
Sbjct: 75 cattggct 82
>36180_der-mir-79:mirbase
Length = 92
Score = 127 bits (64), Expect = 1e-30
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ttgccgttgctttggcgctttagctgtatgatagatttaaa-tacttcataaagctagat 59
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8 ttgccattgctttggcgctttagctgtatgatagatttaaactacttcataaagctagat 67
Query: 60 taccaaagcattggct 75
||||||||||||||||
Sbjct: 68 taccaaagcattggct 83
>36375_dme-mir-79:mirbase
Length = 97
Score = 127 bits (64), Expect = 1e-30
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ttgccgttgctttggcgctttagctgtatgatagatttaaa-tacttcataaagctagat 59
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 11 ttgccattgctttggcgctttagctgtatgatagatttaaactacttcataaagctagat 70
Query: 60 taccaaagcattggct 75
||||||||||||||||
Sbjct: 71 taccaaagcattggct 86
>36376_dme-mir-79:mirbase
Length = 97
Score = 127 bits (64), Expect = 1e-30
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ttgccgttgctttggcgctttagctgtatgatagatttaaa-tacttcataaagctagat 59
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 11 ttgccattgctttggcgctttagctgtatgatagatttaaactacttcataaagctagat 70
Query: 60 taccaaagcattggct 75
||||||||||||||||
Sbjct: 71 taccaaagcattggct 86
>37140_dse-mir-79:mirbase
Length = 92
Score = 127 bits (64), Expect = 1e-30
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ttgccgttgctttggcgctttagctgtatgatagatttaaa-tacttcataaagctagat 59
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8 ttgccattgctttggcgctttagctgtatgatagatttaaactacttcataaagctagat 67
Query: 60 taccaaagcattggct 75
||||||||||||||||
Sbjct: 68 taccaaagcattggct 83
>36268_dgr-mir-79:mirbase
Length = 76
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 ttgccgttgctttggcgctttagctgtatgatagatttaaatacttcataaagctagatt 60
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttgccgtcgctttggcgctttagctgtatgatagatttgaatacttcataaagctagatt 60
Query: 61 accaaagcat 70
||||||||||
Sbjct: 61 accaaagcat 70
>36851_dpe-mir-79:mirbase
Length = 77
Score = 123 bits (62), Expect = 2e-29
Identities = 69/70 (98%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 8 tgctttggcgctttagctgtatgatagatttaaa-tacttcataaagctagattaccaaa 66
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8 tgctttggcgctttagctgtatgatagatttaaaatacttcataaagctagattaccaaa 67
Query: 67 gcattggctc 76
||||||||||
Sbjct: 68 gcattggctc 77
>36927_dps-mir-79:mirbase
Length = 84
Score = 123 bits (62), Expect = 2e-29
Identities = 69/70 (98%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 8 tgctttggcgctttagctgtatgatagatttaaa-tacttcataaagctagattaccaaa 66
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 13 tgctttggcgctttagctgtatgatagatttaaaatacttcataaagctagattaccaaa 72
Query: 67 gcattggctc 76
||||||||||
Sbjct: 73 gcattggctc 82
>37508_dya-mir-79:mirbase
Length = 92
Score = 119 bits (60), Expect = 3e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ttgccgttgctttggcgctttagctgtatgatagattta-aatacttcataaagctagat 59
||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 8 ttgccattgctttggcgctttagctgtatgatagatttatactacttcataaagctagat 67
Query: 60 taccaaagcattggct 75
||||||||||||||||
Sbjct: 68 taccaaagcattggct 83
>37431_dwi-mir-79-1:mirbase
Length = 76
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 8 tgctttggcgctttagctgtatgatagatttaaatacttcataaagctagattaccaaag 67
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 8 tgctttggcgctttagctgtatgatagatttgactacttcataaagctagattaccaaag 67
Query: 68 cattggctc 76
||| |||||
Sbjct: 68 catgggctc 76
>37432_dwi-mir-79-2:mirbase
Length = 76
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 8 tgctttggcgctttagctgtatgatagatttaaatacttcataaagctagattaccaaag 67
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 8 tgctttggcgctttagctgtatgatagatttgactacttcataaagctagattaccaaag 67
Query: 68 cattggctc 76
||| |||||
Sbjct: 68 catgggctc 76
>35186_aae-mir-79:mirbase
Length = 96
Score = 101 bits (51), Expect = 7e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 8 tgctttggcgctttagctgtatgatagatttaaatacttcataaagctagattaccaaag 67
|||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||
Sbjct: 15 tgctttggcgctttagctgtatgatagaatttaatatttcataaagctagattaccaaag 74
Query: 68 cat 70
|||
Sbjct: 75 cat 77
>36016_cqu-mir-79:mirbase
Length = 75
Score = 101 bits (51), Expect = 7e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 8 tgctttggcgctttagctgtatgatagatttaaatacttcataaagctagattaccaaag 67
|||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||
Sbjct: 8 tgctttggcgctttagctgtatgatagaatttaatatttcataaagctagattaccaaag 67
Query: 68 cat 70
|||
Sbjct: 68 cat 70
>35284_aga-mir-79:mirbase
Length = 94
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/64 (92%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 9 gctttggcgctttagctgtatgataga--tttaaatacttcataaagctagattaccaaa 66
||||||||||||||||||||||||||| || || || ||||||||||||||||||||||
Sbjct: 17 gctttggcgctttagctgtatgatagaatttgaactatttcataaagctagattaccaaa 76
Query: 67 gcat 70
||||
Sbjct: 77 gcat 80
>35520_bmo-mir-9b:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 45 ttcataaagctagattaccaaagcat 70
||||||||||||||||||||||||||
Sbjct: 40 ttcataaagctagattaccaaagcat 15
>35533_bmo-mir-79:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 ttcataaagctagattaccaaagcat 70
||||||||||||||||||||||||||
Sbjct: 55 ttcataaagctagattaccaaagcat 80
>35346_ame-mir-9b:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 46 tcataaagctagattaccaaagca 69
||||||||||||||||||||||||
Sbjct: 40 tcataaagctagattaccaaagca 17
>35360_ame-mir-79:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 tcataaagctagattaccaaagca 69
||||||||||||||||||||||||
Sbjct: 64 tcataaagctagattaccaaagca 87
>37699_tca-mir-9b:mirbase
Length = 169
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 tcataaagctagattaccaaagca 69
||||||||||||||||||||||||
Sbjct: 92 tcataaagctagattaccaaagca 115
>37700_tca-mir-9b:mirbase
Length = 169
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 tcataaagctagattaccaaagca 69
||||||||||||||||||||||||
Sbjct: 92 tcataaagctagattaccaaagca 115
>38743_cte-mir-79:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 42 tacttcataaagctagattaccaaagc 68
|||||||||||||||| ||||||||||
Sbjct: 55 tacttcataaagctaggttaccaaagc 81
>38729_cte-mir-9:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 42 tacttcataaagctagattaccaaagc 68
|||||||||||||||| ||||||||||
Sbjct: 53 tacttcataaagctaggttaccaaagc 79
>38542_crm-mir-79:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 acttcataaagctagattaccaaagc 68
||||||||||||||| ||||||||||
Sbjct: 66 acttcataaagctaggttaccaaagc 91
>38099_bma-mir-9:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 cttcataaagctagattaccaaagc 68
|||||||||||||| ||||||||||
Sbjct: 49 cttcataaagctaggttaccaaagc 73
>38107_bma-mir-79:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 cttcataaagctagattaccaaagc 68
|||||||||||||| ||||||||||
Sbjct: 49 cttcataaagctaggttaccaaagc 73
>38190_cbr-mir-79:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 cttcataaagctagattaccaaagc 68
|||||||||||||| ||||||||||
Sbjct: 53 cttcataaagctaggttaccaaagc 77
>38623_ppc-mir-79:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 ttcataaagctagattaccaaagc 68
||||||||||||| ||||||||||
Sbjct: 56 ttcataaagctaggttaccaaagc 79
>38316_cel-mir-79:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 ttcataaagctagattaccaaagc 68
||||||||||||| ||||||||||
Sbjct: 58 ttcataaagctaggttaccaaagc 81
>34808_spu-mir-9:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 8e-04
Identities = 40/47 (85%)
Strand = Plus / Plus
Query: 21 tagctgtatgatagatttaaatacttcataaagctagattaccaaag 67
||||||||||| ||| | ||| | |||||||||||| |||||||||
Sbjct: 33 tagctgtatgagtgatgtcaatgcatcataaagctaggttaccaaag 79
>34817_spu-mir-79:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 8e-04
Identities = 40/47 (85%)
Strand = Plus / Plus
Query: 21 tagctgtatgatagatttaaatacttcataaagctagattaccaaag 67
||||||||||| ||| | ||| | |||||||||||| |||||||||
Sbjct: 34 tagctgtatgagtgatgtcaatgcatcataaagctaggttaccaaag 80
