miRNEST 2.0, an integrative microRNA resource :: BLAST
>42766_zma-MIR171f:mirbase
Length = 155
Score = 238 bits (120), Expect = 1e-63
Identities = 149/157 (94%), Gaps = 5/157 (3%)
Strand = Plus / Plus
Query: 3 tggttgttggctgagagagtgcgatgttggcatggctcaatcaactcgccggccgcgggt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tggttgttggctgagagagtgcgatgttggcatggctcaatcaactcgccggccgcgggt 61
Query: 63 ggct--tagcttattaattctgcgtttttgatcgaggtgcgggcgcagtgtttaattgat 120
|||| |||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 62 ggcttatagc---ttaattctgcgcattcgatcgaggtgcgggcgcagtgtttaattgat 118
Query: 121 tgagccgtgccaatatcacaaccttctctagcctata 157
|||||||||||||||||||||||||||||||||||||
Sbjct: 119 tgagccgtgccaatatcacaaccttctctagcctata 155
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcacaaccttctctagcctat 156
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgattgagccgtgccaatatcacaaccttctctagcctat 161
Score = 69.9 bits (35), Expect = 6e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 8 gttggctgagagagtgcgatgttggcatggctcaatcaa 46
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 gttggctgagagagtgcgatgttggcatggttcaatcaa 42
>42769_zma-MIR171i:mirbase
Length = 104
Score = 79.8 bits (40), Expect = 6e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcacaaccttctctagccta 155
||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcacaaccttctctagccta 103
Score = 75.8 bits (38), Expect = 9e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 8 gttggctgagagagtgcgatgttggcatggctcaatcaactcgccggccg 57
||||||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 4 gttggctgagagagtgcgatgttggcacggttcaatcaaatcgccggccg 53
>41986_osa-MIR171f:mirbase
Length = 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 gagagtgcgatgttggcatggctcaatcaa 46
||||||||||||||||||||| ||||||||
Sbjct: 3 gagagtgcgatgttggcatggttcaatcaa 32
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcacaa 141
|||||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcacaa 121
>40062_ath-MIR171c:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 110 gtttaattgattgagccgtgccaatatcac 139
||||| ||||||||||||||||||||||||
Sbjct: 80 gtttatttgattgagccgtgccaatatcac 109
>41874_far-MIR171:mirbase
Length = 130
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 gagtgcgatgttggcatggctcaatcaac 47
||||||||||||||||||| |||||||||
Sbjct: 1 gagtgcgatgttggcatggttcaatcaac 29
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcacaaccttc 146
||||||||||||||||||||| ||| ||||
Sbjct: 90 tgattgagccgtgccaatatcgcaagcttc 119
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 10 tggctgagagagtgcgatgttggcatggctcaatcaa 46
|||||| |||||||||||||||||| || ||||||||
Sbjct: 17 tggctgggagagtgcgatgttggcacggttcaatcaa 53
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcacaaccttct 147
||||||||||||||||||||| ||| |||||
Sbjct: 114 tgattgagccgtgccaatatcgcaagcttct 144
>40457_gma-MIR171c:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcaca 140
|||||||||||||||||||||||||
Sbjct: 71 ttgattgagccgtgccaatatcaca 95
>42762_zma-MIR171b:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>41983_osa-MIR171c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 68 ttgattgagccgtgccaatatcac 91
>41982_osa-MIR171b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 69 ttgattgagccgtgccaatatcac 92
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 63 ttgattgagccgtgccaatatcac 86
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatcac 89
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 69 ttgattgagccgtgccaatatcac 92
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcaca 140
||||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcaca 94
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcaca 140
||||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcaca 94
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 70 ttgattgagccgtgccaatatcac 93
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 71 ttgattgagccgtgccaatatcac 94
>41216_crt-MIR171:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 160 ttgattgagccgtgccaatatcac 183
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcaca 140
||||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatcaca 98
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 76 ttgattgagccgtgccaatatcac 99
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 76 ttgattgagccgtgccaatatcac 99
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatcac 89
>40360_rco-MIR171b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 62 ttgattgagccgtgccaatatcac 85
>40359_rco-MIR171a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 63 ttgattgagccgtgccaatatcac 86
>40318_bra-MIR171a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>40305_bol-MIR171a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 67 ttgattgagccgtgccaatatcac 90
>40289_bna-MIR171e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatcac 89
>40288_bna-MIR171d:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 67 ttgattgagccgtgccaatatcac 90
>39851_aly-MIR171c:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatcac 139
||||||||||||||||||||||||
Sbjct: 73 ttgattgagccgtgccaatatcac 96
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcac 139
|||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatcac 112
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcac 139
|||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatcac 115
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatcac 139
|||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77
>42641_tae-MIR171b:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatcac 111
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatca 138
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 tgattgagccgtgccaatatca 138
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>41538_sly-MIR171a:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 86 ttgattgagccgtgccaatatc 107
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 99 ttgattgagccgtgccaatatc 120
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 22 ttgattgagccgtgccaatatc 1
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 83 ttgattgagccgtgccaatatc 104
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 120 ttgattgagccgtgccaatatc 141
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>40364_rco-MIR171f:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 85 ttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 ttgattgagccgtgccaatatc 137
||||||||||||||||||||||
Sbjct: 98 ttgattgagccgtgccaatatc 119
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40061_ath-MIR171b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>39850_aly-MIR171b:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 87 gattgagccgtgccaatatcac 108
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 gattgagccgtgccaatatcac 139
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
