miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36271_dgr-mir-92b:mirbase
Length = 91
Score = 172 bits (87), Expect = 3e-44
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaatt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
|||||||||||||||||||||||||||||||
Sbjct: 61 gcactagtcccggcctgcagtgagtgtcgca 91
>37357_dvi-mir-92b:mirbase
Length = 91
Score = 172 bits (87), Expect = 3e-44
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatccaaatt 60
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
|||||||||||||||||||||||||||||||
Sbjct: 61 gcactagtcccggcctgcagtgagtgtcgca 91
>36854_dpe-mir-92b:mirbase
Length = 91
Score = 117 bits (59), Expect = 1e-27
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaatt 60
|||||||||||||||||| |||||| |||||||||||| ||| | |||||||||||||
Sbjct: 1 aacgtcacctgatgtaggccgtgcccagtgcttatttgtcgttgtttgaaaatacaaatt 60
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
|||||||||||||||||||| ||||||||||
Sbjct: 61 gcactagtcccggcctgcagagagtgtcgca 91
>36930_dps-mir-92b:mirbase
Length = 100
Score = 117 bits (59), Expect = 1e-27
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaatt 60
|||||||||||||||||| |||||| |||||||||||| ||| | |||||||||||||
Sbjct: 4 aacgtcacctgatgtaggccgtgcccagtgcttatttgtcgttgtttgaaaatacaaatt 63
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
|||||||||||||||||||| ||||||||||
Sbjct: 64 gcactagtcccggcctgcagagagtgtcgca 94
>37436_dwi-mir-92b:mirbase
Length = 91
Score = 107 bits (54), Expect = 1e-24
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 2 acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaattg 61
||||||| |||||||| |||||||||||||||||||||| ||| || ||||||||||
Sbjct: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
Query: 62 cactagtcccggcctgcagtgagtgtcgca 91
|||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtaagtgtcgca 91
>36183_der-mir-92b:mirbase
Length = 91
Score = 103 bits (52), Expect = 2e-23
Identities = 84/92 (91%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgt-tatgcgaaaatacaaat 59
|||||||||||||||||| |||||| |||||||||||||| | | ||||| |||||||
Sbjct: 1 aacgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaa-tacaaat 59
Query: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
||||||||||||||||||||||||||||||||
Sbjct: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
>37143_dse-mir-92b:mirbase
Length = 91
Score = 103 bits (52), Expect = 2e-23
Identities = 84/92 (91%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgt-tatgcgaaaatacaaat 59
|||||||||||||||||| |||||| |||||||||||||| | | ||||| |||||||
Sbjct: 1 aacgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaa-tacaaat 59
Query: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
||||||||||||||||||||||||||||||||
Sbjct: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
>37218_dsi-mir-92b:mirbase
Length = 91
Score = 103 bits (52), Expect = 2e-23
Identities = 84/92 (91%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgt-tatgcgaaaatacaaat 59
|||||||||||||||||| |||||| |||||||||||||| | | ||||| |||||||
Sbjct: 1 aacgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaa-tacaaat 59
Query: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
||||||||||||||||||||||||||||||||
Sbjct: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
>37511_dya-mir-92b:mirbase
Length = 91
Score = 103 bits (52), Expect = 2e-23
Identities = 84/92 (91%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgt-tatgcgaaaatacaaat 59
|||||||||||||||||| |||||| |||||||||||||| | | ||||| |||||||
Sbjct: 1 aacgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaa-tacaaat 59
Query: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
||||||||||||||||||||||||||||||||
Sbjct: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
>36105_dan-mir-92b:mirbase
Length = 88
Score = 101 bits (51), Expect = 8e-23
Identities = 79/87 (90%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 2 acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaattg 61
||||||||||||||||| |||||| |||||||||||||| | | |||| |||||||||
Sbjct: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttacttttggaaa-tacaaattg 59
Query: 62 cactagtcccggcctgcagtgagtgtc 88
|||||||||||||||||||||||||||
Sbjct: 60 cactagtcccggcctgcagtgagtgtc 86
>36381_dme-mir-92b:mirbase
Length = 100
Score = 95.6 bits (48), Expect = 5e-21
Identities = 83/92 (90%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgt-tatgcgaaaatacaaat 59
|||||||||||||||||| |||||| |||||||||||||| | | ||||| |||||||
Sbjct: 4 aacgtcacctgatgtaggccgtgcccagtgcttatttgttgcattttcgaaa-tacaaat 62
Query: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
|||||||||||||||||||| |||||||||||
Sbjct: 63 tgcactagtcccggcctgcaatgagtgtcgca 94
>36382_dme-mir-92b:mirbase
Length = 100
Score = 95.6 bits (48), Expect = 5e-21
Identities = 83/92 (90%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgt-tatgcgaaaatacaaat 59
|||||||||||||||||| |||||| |||||||||||||| | | ||||| |||||||
Sbjct: 4 aacgtcacctgatgtaggccgtgcccagtgcttatttgttgcattttcgaaa-tacaaat 62
Query: 60 tgcactagtcccggcctgcagtgagtgtcgca 91
|||||||||||||||||||| |||||||||||
Sbjct: 63 tgcactagtcccggcctgcaatgagtgtcgca 94
>35189_aae-mir-92b:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgcag 80
||||||||||| ||||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgcag 75
>35287_aga-mir-92b:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgcag 80
||||||||||| ||||||||||||||
Sbjct: 52 caaattgcacttgtcccggcctgcag 77
>37733_tca-mir-92b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgca 79
||||||||||| |||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgca 74
>37734_tca-mir-92b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgca 79
||||||||||| |||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgca 74
>38863_lgi-mir-92:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 caaattgcactagtcccggcctgc 78
||||||||||| ||||||||||||
Sbjct: 58 caaattgcacttgtcccggcctgc 81
