miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37367_dvi-mir-274:mirbase
Length = 105
Score = 119 bits (60), Expect = 3e-28
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 tttcggtttgtgaccgacactaacgggtagttgaggcatctcgtattcgctgttttatac 60
||||||||||||||||||||||||||||||||| |||| |||| || |||||||| |||
Sbjct: 12 tttcggtttgtgaccgacactaacgggtagttggggcacctcgaatacgctgttt--tac 69
Query: 61 tcgtttttgcgatcacaaattctgaaa 87
|||||||||||||||||||||||||||
Sbjct: 70 tcgtttttgcgatcacaaattctgaaa 96
>36282_dgr-mir-274:mirbase
Length = 82
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 tcggtttgtgaccgacactaacgggtagtt 32
||||||||||||||||||||||||||||||
Sbjct: 1 tcggtttgtgaccgacactaacgggtagtt 30
>37446_dwi-mir-274:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaaattctgaaa 87
||||||||||||||||||||||||||||||
Sbjct: 71 tactcgtttttgcgatcacaaattctgaaa 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tttgtgaccgacactaacgggtagt 31
|||||||||||||||||||||||||
Sbjct: 14 tttgtgaccgacactaacgggtagt 38
>36115_dan-mir-274:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaaattctgaaa 87
||||||||||||||||||||||| ||||||
Sbjct: 58 tactcgtttttgcgatcacaaatcctgaaa 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tttcggtttgtgaccgacactaacgggta 29
||||| |||||||||||||||||||||||
Sbjct: 9 tttcgttttgtgaccgacactaacgggta 37
>36409_dme-mir-274:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaaattctgaaa 87
|||||||||||||||||||||||| |||||
Sbjct: 62 tactcgtttttgcgatcacaaattatgaaa 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tttcggtttgtgaccgacactaacgggta 29
||||| |||||||||||||||||||||||
Sbjct: 14 tttcgttttgtgaccgacactaacgggta 42
>36410_dme-mir-274:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaaattctgaaa 87
|||||||||||||||||||||||| |||||
Sbjct: 62 tactcgtttttgcgatcacaaattatgaaa 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tttcggtttgtgaccgacactaacgggta 29
||||| |||||||||||||||||||||||
Sbjct: 14 tttcgttttgtgaccgacactaacgggta 42
>36193_der-mir-274:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tttcggtttgtgaccgacactaacgggta 29
||||| |||||||||||||||||||||||
Sbjct: 11 tttcgttttgtgaccgacactaacgggta 39
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaaat 80
|||||||||||||||||||||||
Sbjct: 59 tactcgtttttgcgatcacaaat 81
>37153_dse-mir-274:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tttcggtttgtgaccgacactaacgggta 29
||||| |||||||||||||||||||||||
Sbjct: 11 tttcgttttgtgaccgacactaacgggta 39
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaaat 80
|||||||||||||||||||||||
Sbjct: 59 tactcgtttttgcgatcacaaat 81
>37522_dya-mir-274:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tttcggtttgtgaccgacactaacgggta 29
||||| |||||||||||||||||||||||
Sbjct: 11 tttcgttttgtgaccgacactaacgggta 39
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaaat 80
|||||||||||||||||||||||
Sbjct: 59 tactcgtttttgcgatcacaaat 81
>36867_dpe-mir-274:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tttgtgaccgacactaacgggta 29
|||||||||||||||||||||||
Sbjct: 17 tttgtgaccgacactaacgggta 39
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaa 78
|||||||||||||||||||||
Sbjct: 57 tactcgtttttgcgatcacaa 77
>36946_dps-mir-274:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tttgtgaccgacactaacgggta 29
|||||||||||||||||||||||
Sbjct: 20 tttgtgaccgacactaacgggta 42
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tactcgtttttgcgatcacaa 78
|||||||||||||||||||||
Sbjct: 60 tactcgtttttgcgatcacaa 80
>35547_bmo-mir-274:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 ggtttgtgaccgacactaacggg 27
|||||||||||| ||||||||||
Sbjct: 21 ggtttgtgaccgtcactaacggg 43
