miRNEST 2.0, an integrative microRNA resource :: BLAST
>42704_zma-MIR160d:mirbase
Length = 142
Score = 246 bits (124), Expect = 3e-66
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 1 cgggatcgatatgcctggctccctgtatgccactcgcatggctgccaactcatcatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cgggatcgatatgcctggctccctgtatgccactcgcatggctgccaactcatcatgcat 69
Query: 61 acactgctagctagtcgttggctccactgcggatggcgtgcgtggagccaagcatgaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acactgctagctagtcgttggctccactgcggatggcgtgcgtggagccaagcatgaccg 129
Query: 121 atca 124
||||
Sbjct: 130 atca 133
>41927_osa-MIR160e:mirbase
Length = 114
Score = 75.8 bits (38), Expect = 7e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 8 gatatgcctggctccctgtatgccactcgcatggctgccaac 49
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7 gatatgcctggctccctgtatgccgctcgcatggctgccaac 48
>42636_tae-MIR160:mirbase
Length = 148
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 8 gatatgcctggctccctgtatgccactcgcatggctgccaactc 51
|||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 18 gatatgcctggctccctgtatgccactcgcgtagctgccaactc 61
Score = 65.9 bits (33), Expect = 7e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 76 cgttggctccactgcggatggcgtgcgtggagccaagcatgaccg 120
||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 73 cgttggctctaccgcggatggcgtgcgaggagccaagcatgaccg 117
>41926_osa-MIR160d:mirbase
Length = 142
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 78 ttggctccactgcggatggcgtgcgtggagccaagcatgacc 119
||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 101 ttggctctactgcggatggcgtgcgaggagccaagcatgacc 142
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 8 gatatgcctggctccctgtatgccactcgcatggctgccaa 48
|||||||||||||||||||||||||||||| | ||||||||
Sbjct: 4 gatatgcctggctccctgtatgccactcgcgtagctgccaa 44
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 8 gatatgcctggctccctgtatgccactcgcatggctgccaac 49
|||||||||||||||||||||||||||||| | |||||||||
Sbjct: 28 gatatgcctggctccctgtatgccactcgcgtagctgccaac 69
Score = 65.9 bits (33), Expect = 7e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 76 cgttggctccactgcggatggcgtgcgtggagccaagcatgaccg 120
||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 104 cgttggctctaccgcggatggcgtgcgaggagccaagcatgaccg 148
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 3e-11
Identities = 87/103 (84%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactcgcatggctgccaactcatcatgcatacactgctagc 71
|||||||||||||||||||||||||| | ||||||||| |||| | ||| || || |
Sbjct: 1 tgcctggctccctgtatgccactcgcttagctgccaacaactcatac-tacgttgttaac 59
Query: 72 tagtcgttggctccactgcggatggcgtgcgtggagccaagca 114
| ||||||||| ||||||||||||||||| |||||||||||
Sbjct: 60 ga--cgttggctctactgcggatggcgtgcgaggagccaagca 100
>42706_zma-MIR160f:mirbase
Length = 116
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgccactcgcatggct 43
||||||||||||||||||||||| |||||||||||
Sbjct: 18 atatgcctggctccctgtatgccgctcgcatggct 52
>42705_zma-MIR160e:mirbase
Length = 94
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgccactcgcatggct 43
|||||||||||||||||||||||||||||| ||||
Sbjct: 6 atatgcctggctccctgtatgccactcgcacggct 40
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactcgcatggct 43
||||||||||||||||||||||||||| ||||
Sbjct: 1 tgcctggctccctgtatgccactcgcacggct 32
>42703_zma-MIR160c:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccactc 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccactc 32
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>41925_osa-MIR160c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccactc 30
>41924_osa-MIR160b:mirbase
Length = 139
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccactc 53
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccactc 54
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 17 atatgcctggctccctgtatgcca 40
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgccac 32
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgccac 32
>40340_rco-MIR160b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgccac 27
>40021_ath-MIR160c:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgccac 45
>42707_zma-MIR160g:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgccac 23
>41869_far-MIR160:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgccac 74
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 2 tatgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 40 tatgcctggctccctgtatgcca 62
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccact 34
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>42702_zma-MIR160b:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>42701_zma-MIR160a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccac 31
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41923_osa-MIR160a:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccac 25
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 gcggatggcgtgcgtggagccaagcatg 116
|||||||||||||| ||||||| |||||
Sbjct: 65 gcggatggcgtgcgaggagccatgcatg 92
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 88 tgcggatggcgtgcgtggagccaagcat 115
||||| ||||||||| ||||||||||||
Sbjct: 68 tgcgggtggcgtgcgaggagccaagcat 95
>40020_ath-MIR160b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39808_aly-MIR160b:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>39374_pab-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgccac 35
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgcca 53
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40658_mtr-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40436_gma-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40339_rco-MIR160a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gcctggctccctgtatgccac 33
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
