miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36836_dpe-mir-8:mirbase
Length = 87
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttagatacctctaatactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttagatacctctaatactg 60
Query: 61 tcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||
Sbjct: 61 tcaggtaaagatgtcgtccgtgtcctt 87
>36165_der-mir-8:mirbase
Length = 87
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttagatacctctaatactg 60
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttttataactctaatactg 60
Query: 61 tcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||
Sbjct: 61 tcaggtaaagatgtcgtccgtgtcctt 87
>36345_dme-mir-8:mirbase
Length = 87
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttagatacctctaatactg 60
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttttataactctaatactg 60
Query: 61 tcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||
Sbjct: 61 tcaggtaaagatgtcgtccgtgtcctt 87
>36346_dme-mir-8:mirbase
Length = 87
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttagatacctctaatactg 60
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttttataactctaatactg 60
Query: 61 tcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||
Sbjct: 61 tcaggtaaagatgtcgtccgtgtcctt 87
>37203_dsi-mir-8:mirbase
Length = 87
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttagatacctctaatactg 60
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttttataactctaatactg 60
Query: 61 tcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||
Sbjct: 61 tcaggtaaagatgtcgtccgtgtcctt 87
>37493_dya-mir-8:mirbase
Length = 87
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttagatacctctaatactg 60
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttttataactctaatactg 60
Query: 61 tcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||
Sbjct: 61 tcaggtaaagatgtcgtccgtgtcctt 87
>36087_dan-mir-8:mirbase
Length = 88
Score = 143 bits (72), Expect = 2e-35
Identities = 85/88 (96%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-agatacctctaatact 59
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
Query: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
||||||||||||||||||||||||||||
Sbjct: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
>37125_dse-mir-8:mirbase
Length = 87
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttagatacctctaatactg 60
||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttttaaaactctaatactg 60
Query: 61 tcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||
Sbjct: 61 tcaggtaaagatgtcgtccgtgtcctt 87
>36763_dmo-mir-8:mirbase
Length = 90
Score = 121 bits (61), Expect = 9e-29
Identities = 83/90 (92%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 2 aggacatctgttcacatcttaccgggcagcattagatcc----tttagatacctctaata 57
||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||
Sbjct: 1 aggacatctgttcacatcttaccgggcagcattagattcctgttttaaataactctaata 60
Query: 58 ctgtcaggtaaagatgtcgtccgtgtcctt 87
||||||||||||||||||||||||||||||
Sbjct: 61 ctgtcaggtaaagatgtcgtccgtgtcctt 90
>37414_dwi-mir-8:mirbase
Length = 92
Score = 119 bits (60), Expect = 3e-28
Identities = 84/92 (91%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatc-----ctttagatacctctaa 55
|||||||||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
Query: 56 tactgtcaggtaaagatgtcgtccgtgtcctt 87
||||||||||||||||||||||||||||||||
Sbjct: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
>36253_dgr-mir-8:mirbase
Length = 91
Score = 115 bits (58), Expect = 5e-27
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcc----tttagatacctctaat 56
|||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
Query: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||||||
Sbjct: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
>37339_dvi-mir-8:mirbase
Length = 91
Score = 115 bits (58), Expect = 5e-27
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcc----tttagatacctctaat 56
|||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
Query: 57 actgtcaggtaaagatgtcgtccgtgtcctt 87
|||||||||||||||||||||||||||||||
Sbjct: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
>35171_aae-mir-8:mirbase
Length = 79
Score = 95.6 bits (48), Expect = 5e-21
Identities = 69/75 (92%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagatccttt--agatacctctaatactgtcagg 65
||||||||||||||||||||||||||||||| ||| | |||| |||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagatatttttgaaatacttctaatactgtcagg 61
Query: 66 taaagatgtcgtccg 80
|||||||||||||||
Sbjct: 62 taaagatgtcgtccg 76
>36006_cqu-mir-8:mirbase
Length = 77
Score = 95.6 bits (48), Expect = 5e-21
Identities = 69/75 (92%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagatccttt--agatacctctaatactgtcagg 65
||||||||||||||||||||||||||||||| ||| | |||| |||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagatattttttaaatacttctaatactgtcagg 61
Query: 66 taaagatgtcgtccg 80
|||||||||||||||
Sbjct: 62 taaagatgtcgtccg 76
>35274_aga-mir-8:mirbase
Length = 86
Score = 83.8 bits (42), Expect = 2e-17
Identities = 68/76 (89%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagatccttta---gatacctctaatactgtcag 64
||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 6 tctgttcacatcttaccgggcagcattagatatgttatcggatatttctaatactgtcag 65
Query: 65 gtaaagatgtcgtccg 80
||||||||||||||||
Sbjct: 66 gtaaagatgtcgtccg 81
>37695_tca-mir-8:mirbase
Length = 73
Score = 71.9 bits (36), Expect = 7e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagatc-ctttagatacctctaatactgtcaggta 67
||||| |||||||||||||||||||||||| | || |||| |||||||||||||||||
Sbjct: 2 ctgttaacatcttaccgggcagcattagattacattttatacttctaatactgtcaggta 61
Query: 68 aagatgtc 75
||||||||
Sbjct: 62 aagatgtc 69
>37696_tca-mir-8:mirbase
Length = 73
Score = 71.9 bits (36), Expect = 7e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagatc-ctttagatacctctaatactgtcaggta 67
||||| |||||||||||||||||||||||| | || |||| |||||||||||||||||
Sbjct: 2 ctgttaacatcttaccgggcagcattagattacattttatacttctaatactgtcaggta 61
Query: 68 aagatgtc 75
||||||||
Sbjct: 62 aagatgtc 69
>35344_ame-mir-8:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 3e-13
Identities = 67/74 (90%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagatcctttagat-acc-tctaatactgtcag 64
|||||||||||||||||||||||||||||||| | || | ||| ||||||||||||||
Sbjct: 6 atctgttcacatcttaccgggcagcattagat--tgaagttgaccttctaatactgtcag 63
Query: 65 gtaaagatgtcgtc 78
||||||||||||||
Sbjct: 64 gtaaagatgtcgtc 77
>37602_nlo-mir-8:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattaga-tcctttagatacctctaatactgtcagg 65
||||||| ||||||||||||||||||||||| | | || || |||||||||||||||
Sbjct: 6 atctgtttacatcttaccgggcagcattagattacatttgaattttctaatactgtcagg 65
Query: 66 taaagatgtcgtc 78
|||||||||||||
Sbjct: 66 taaagatgtcgtc 78
>37635_nvi-mir-8:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattaga-tcctttagatacctctaatactgtcagg 65
||||||| ||||||||||||||||||||||| | | || || |||||||||||||||
Sbjct: 6 atctgtttacatcttaccgggcagcattagattacatttgaattttctaatactgtcagg 65
Query: 66 taaagatgtcgtc 78
|||||||||||||
Sbjct: 66 taaagatgtcgtc 78
>35518_bmo-mir-8:mirbase
Length = 102
Score = 63.9 bits (32), Expect = 2e-11
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 11 gttcacatcttaccgggcagcattaga-tcctttagatacct-ctaatactgtcaggtaa 68
|||| |||||||||||||||||||||| |||| | ||| | |||||||||||||||||
Sbjct: 16 gttcgcatcttaccgggcagcattagagtcctgtctatattttctaatactgtcaggtaa 75
Query: 69 agatgtcgtccg 80
||||||||||||
Sbjct: 76 agatgtcgtccg 87
>34999_dpu-mir-8:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatgtcgtccgtg 82
||||||||||||||||||||||||| ||||||
Sbjct: 59 tctaatactgtcaggtaaagatgtcctccgtg 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 catcttaccgggcagcattagat 38
|||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagat 32
>38851_lgi-mir-8:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatgtc 75
|||||||||||||||||||||||||
Sbjct: 59 tctaatactgtcaggtaaagatgtc 83
>38728_cte-mir-8:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatgtc 75
|||||||||||||||||||||||||
Sbjct: 58 tctaatactgtcaggtaaagatgtc 82
>34963_isc-mir-8:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatgtc 75
|||||||||||||||||||||||||
Sbjct: 56 tctaatactgtcaggtaaagatgtc 80
>37561_lmi-mir-8:mirbase
Length = 61
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 catcttaccgggcagcattagat 38
|||||||||||||||||||||||
Sbjct: 1 catcttaccgggcagcattagat 23
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatgtc 75
|||||||||||||||||| ||||||
Sbjct: 37 tctaatactgtcaggtaacgatgtc 61
>35047_api-mir-8:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatgtc 75
|||||||||||||||||| ||||||
Sbjct: 39 tctaatactgtcaggtaatgatgtc 63
>39065_sme-mir-8a:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatg 73
|||||||||||||||||| ||||
Sbjct: 43 tctaatactgtcaggtaacgatg 65
>38969_sja-mir-8:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatg 73
||||||||||| |||||||||||
Sbjct: 42 tctaatactgttaggtaaagatg 64
>38968_sja-mir-8:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 51 tctaatactgtcaggtaaagatg 73
||||||||||| |||||||||||
Sbjct: 42 tctaatactgttaggtaaagatg 64
>38211_cbr-mir-236:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 ctctaatactgtcaggtaa 68
|||||||||||||||||||
Sbjct: 58 ctctaatactgtcaggtaa 76
