miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36838_dpe-mir-9b:mirbase
Length = 91
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||||||||||||||||||||||||||||
Sbjct: 61 ctttatcaccaaaacccaaatggtttttgca 91
>37416_dwi-mir-9b-1:mirbase
Length = 90
Score = 101 bits (51), Expect = 8e-23
Identities = 80/87 (91%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 6 attatttgatctttggtgattttagctgtatggtgtat-atcaaagatccatagagcttt 64
|||||||| ||||||||||||||||||||||||||||| | || | ||||||||||||||
Sbjct: 5 attatttggtctttggtgattttagctgtatggtgtatgagcata-atccatagagcttt 63
Query: 65 atcaccaaaacccaaatggtttttgca 91
|| ||||||| ||||||||||||||||
Sbjct: 64 attaccaaaaaccaaatggtttttgca 90
>37417_dwi-mir-9b-2:mirbase
Length = 90
Score = 101 bits (51), Expect = 8e-23
Identities = 80/87 (91%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 6 attatttgatctttggtgattttagctgtatggtgtat-atcaaagatccatagagcttt 64
|||||||| ||||||||||||||||||||||||||||| | || | ||||||||||||||
Sbjct: 5 attatttggtctttggtgattttagctgtatggtgtatgagcata-atccatagagcttt 63
Query: 65 atcaccaaaacccaaatggtttttgca 91
|| ||||||| ||||||||||||||||
Sbjct: 64 attaccaaaaaccaaatggtttttgca 90
>36089_dan-mir-9b:mirbase
Length = 88
Score = 95.6 bits (48), Expect = 5e-21
Identities = 82/91 (90%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
||||||||||||| |||||||||||||||||||||||||| | ||| | |||||||||
Sbjct: 1 tgcacattatttgttctttggtgattttagctgtatggtg--tctcata-ttccatagag 57
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||| ||||||| ||||||||||||||||
Sbjct: 58 ctttattaccaaaaaccaaatggtttttgca 88
>36167_der-mir-9b:mirbase
Length = 89
Score = 95.6 bits (48), Expect = 5e-21
Identities = 81/91 (89%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
|||| |||||||| ||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 1 tgcatattatttgctctttggtgattttagctgtatggtgtgtat--gtgttccatagag 58
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||| ||||||| ||||||||||||||||
Sbjct: 59 ctttattaccaaaaaccaaatggtttttgca 89
>36349_dme-mir-9b:mirbase
Length = 91
Score = 93.7 bits (47), Expect = 2e-20
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
|||| |||||||| ||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 1 tgcatattatttgctctttggtgattttagctgtatggtgtttatgtatattccatagag 60
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||| ||||||| ||||||||||| ||||
Sbjct: 61 ctttattaccaaaaaccaaatggtttctgca 91
>36350_dme-mir-9b:mirbase
Length = 91
Score = 93.7 bits (47), Expect = 2e-20
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
|||| |||||||| ||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 1 tgcatattatttgctctttggtgattttagctgtatggtgtttatgtatattccatagag 60
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||| ||||||| ||||||||||| ||||
Sbjct: 61 ctttattaccaaaaaccaaatggtttctgca 91
>37127_dse-mir-9b:mirbase
Length = 89
Score = 87.7 bits (44), Expect = 1e-18
Identities = 80/91 (87%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
|||| |||||||| |||||||||||||||||||||||||||||| | |||||||||
Sbjct: 1 tgcatattatttggtctttggtgattttagctgtatggtgtata--agtattccatagag 58
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||| ||||||| ||||||||||| ||||
Sbjct: 59 ctttattaccaaaaaccaaatggtttctgca 89
>37496_dya-mir-9b:mirbase
Length = 91
Score = 85.7 bits (43), Expect = 5e-18
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
|||| |||||||| ||||||||||||||||||||||||||| | | | |||||||||
Sbjct: 1 tgcatattatttgctctttggtgattttagctgtatggtgtgtttatgtgttccatagag 60
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||| ||||||| ||||||||||| ||||
Sbjct: 61 ctttattaccaaaaaccaaatggtttctgca 91
>37341_dvi-mir-9b:mirbase
Length = 89
Score = 71.9 bits (36), Expect = 7e-14
Identities = 78/91 (85%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
|||| |||||||| ||||||||||||||||||||||||||| | |||||||||
Sbjct: 1 tgcatattatttgctctttggtgattttagctgtatggtgtgcgcgta--ttccatagag 58
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||| ||||||| ||||||||||||||||
Sbjct: 59 ctttattaccaaaaaccaaatggtttttgca 89
>36255_dgr-mir-9b:mirbase
Length = 89
Score = 69.9 bits (35), Expect = 3e-13
Identities = 79/91 (86%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgtatatcaaagatccatagag 60
|||| |||||||| |||||||||||||||||| |||||||| || | ||||| ||||
Sbjct: 1 tgcatattatttgctctttggtgattttagctctatggtgt-gcgcata-atccacagag 58
Query: 61 ctttatcaccaaaacccaaatggtttttgca 91
|||||| ||||||| ||||||||||||||||
Sbjct: 59 ctttattaccaaaaaccaaatggtttttgca 89
>36765_dmo-mir-9b:mirbase
Length = 89
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 tgcacattatttgatctttggtgattttagctgtatggtgt 41
|||| |||||||| |||||||||||||||||||||||||||
Sbjct: 1 tgcatattatttgttctttggtgattttagctgtatggtgt 41
>35174_aae-mir-9b:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 ttatttgatctttggtgattttagctgtatg 37
||||| |||||||||||||||||||||||||
Sbjct: 7 ttattggatctttggtgattttagctgtatg 37
>35276_aga-mir-9b:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ctttggtgattttagctgtatg 37
||||||||||||||||||||||
Sbjct: 16 ctttggtgattttagctgtatg 37
