miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36850_dpe-mir-34:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 60
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcacagccactatcttcactgccgccgcgacaagc 97
>36373_dme-mir-34:mirbase
Length = 99
Score = 159 bits (80), Expect = 5e-40
Identities = 96/100 (96%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 aattggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttg 60
||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||
Sbjct: 1 aattggctatgcgctttggcagtgtggttagctggttgtgtagcc-aattattgccgttg 59
Query: 61 accattcacagccactatcttcactgccgccgcgacaagc 100
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 60 acaattcacagccactatcttcactgccgccgcgacaagc 99
>36374_dme-mir-34:mirbase
Length = 99
Score = 159 bits (80), Expect = 5e-40
Identities = 96/100 (96%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 aattggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttg 60
||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||
Sbjct: 1 aattggctatgcgctttggcagtgtggttagctggttgtgtagcc-aattattgccgttg 59
Query: 61 accattcacagccactatcttcactgccgccgcgacaagc 100
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 60 acaattcacagccactatcttcactgccgccgcgacaagc 99
>37139_dse-mir-34:mirbase
Length = 96
Score = 153 bits (77), Expect = 3e-38
Identities = 93/97 (95%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
|||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagcc-aattattgccgttgaca 59
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 60 attcacagccactatcttcactgccgccgcgacaagc 96
>37215_dsi-mir-34:mirbase
Length = 96
Score = 153 bits (77), Expect = 3e-38
Identities = 93/97 (95%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
|||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagcc-aattattgccgttgaca 59
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 60 attcacagccactatcttcactgccgccgcgacaagc 96
>37507_dya-mir-34:mirbase
Length = 96
Score = 153 bits (77), Expect = 3e-38
Identities = 93/97 (95%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
|||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagcc-aattattgccgttgaca 59
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 60 attcacagccactatcttcactgccgccgcgacaagc 96
>36179_der-mir-34:mirbase
Length = 96
Score = 129 bits (65), Expect = 4e-31
Identities = 90/97 (92%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
|||||||||||||||||||||||||||||||||||||||||| || ||||| | ||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagcc-aatcattgcttgtgaca 59
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
| |||||||||||||||||||||||||||||||||||
Sbjct: 60 actcacagccactatcttcactgccgccgcgacaagc 96
>37353_dvi-mir-34:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 84/97 (86%), Gaps = 10/97 (10%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
|||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtggccaa----------ttgaca 50
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
| |||||||||||||||||||||||||||||||||||
Sbjct: 51 aatcacagccactatcttcactgccgccgcgacaagc 87
>36267_dgr-mir-34:mirbase
Length = 87
Score = 91.7 bits (46), Expect = 9e-20
Identities = 83/97 (85%), Gaps = 10/97 (10%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
|||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtggccaa----------ctgaca 50
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
| |||||||||||||||||||||||||||||||||||
Sbjct: 51 aatcacagccactatcttcactgccgccgcgacaagc 87
>37430_dwi-mir-34:mirbase
Length = 100
Score = 87.7 bits (44), Expect = 1e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaa 47
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaa 44
>36777_dmo-mir-34:mirbase
Length = 87
Score = 83.8 bits (42), Expect = 2e-17
Identities = 82/97 (84%), Gaps = 10/97 (10%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
|||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtggcca----------cttgaaa 50
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
| |||||||||||||||||||||||||||||||||||
Sbjct: 51 aatcacagccactatcttcactgccgccgcgacaagc 87
>36101_dan-mir-34:mirbase
Length = 97
Score = 81.8 bits (41), Expect = 9e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagc 44
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagc 41
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 64 attcacagccactatcttcactgccgccgcgacaagc 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcacagccactatcttcactgccgccgcgacaagc 97
>37645_nvi-mir-34:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 16 ttggcagtgtggttagctggttgtgtagc 44
|||||||||||||||||||||||||||||
Sbjct: 20 ttggcagtgtggttagctggttgtgtagc 48
>35184_aae-mir-34:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 cgctttggcagtgtggttagctggttgtgtag 43
|||| |||||||||||||||||||||||||||
Sbjct: 11 cgctatggcagtgtggttagctggttgtgtag 42
>37576_ngi-mir-34:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 16 ttggcagtgtggttagctggttgtgtag 43
||||||||||||||||||||||||||||
Sbjct: 7 ttggcagtgtggttagctggttgtgtag 34
>37608_nlo-mir-34:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 16 ttggcagtgtggttagctggttgtgtag 43
||||||||||||||||||||||||||||
Sbjct: 7 ttggcagtgtggttagctggttgtgtag 34
>35531_bmo-mir-34:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 ttggcagtgtggttagctggttgtgta 42
|||||||||||||||||||||||||||
Sbjct: 20 ttggcagtgtggttagctggttgtgta 46
>35283_aga-mir-34:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 cgctttggcagtgtggttagctggttgtgt 41
|||| |||||||||||||||||||||||||
Sbjct: 12 cgctctggcagtgtggttagctggttgtgt 41
>35005_dpu-mir-34:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 ttggcagtgtggttagctggttgtg 40
|||||||||||||||||||||||||
Sbjct: 21 ttggcagtgtggttagctggttgtg 45
>37723_tca-mir-34:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tggcagtgtggttagctggttgtgt 41
|||||||||||||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtgt 35
>37724_tca-mir-34:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tggcagtgtggttagctggttgtgt 41
|||||||||||||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtgt 35
>38739_cte-mir-34:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tggcagtgtggttagctggttgtg 40
||||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgtg 45
>34870_sko-mir-34:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tggcagtgtggttagctggttgt 39
|||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgt 44
>38100_bma-mir-34:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tggcagtgtggttagctggttgt 39
|||||||||||||||||||||||
Sbjct: 23 tggcagtgtggttagctggttgt 45
>35054_api-mir-34:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 tggcagtgtggttagctggttgtgta 42
|||||||||| |||||||||||||||
Sbjct: 1 tggcagtgtgattagctggttgtgta 26
>35358_ame-mir-34:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ttggcagtgtggttagctggttgtgt 41
|||||||||| |||||||||||||||
Sbjct: 20 ttggcagtgttgttagctggttgtgt 45
>38488_crm-mir-34:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ggcagtgtggttagctggttg 38
|||||||||||||||||||||
Sbjct: 16 ggcagtgtggttagctggttg 36
>38127_cbr-mir-34:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ggcagtgtggttagctggttg 38
|||||||||||||||||||||
Sbjct: 19 ggcagtgtggttagctggttg 39
>38268_cel-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ggcagtgtggttagctggttg 38
|||||||||||||||||||||
Sbjct: 17 ggcagtgtggttagctggttg 37
>38858_lgi-mir-34:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tggcagtgtggttagctggt 36
||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggt 41
