miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36853_dpe-mir-92a:mirbase
Length = 85
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 2 tagagattgcccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcac 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tagagattgcccgtaggacgggaaggtgtcaacgttttacattttgaacaaacattgcac 60
Query: 62 ttgtcccggcctatgggcggcttgt 86
|||||||||||||||||||||||||
Sbjct: 61 ttgtcccggcctatgggcggcttgt 85
>37510_dya-mir-92a:mirbase
Length = 90
Score = 119 bits (60), Expect = 4e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 11 cccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcacttgtcccgg 70
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 12 cccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgcacttgtcccgg 71
Query: 71 cctatgggcggcttgt 86
||||||||||| ||||
Sbjct: 72 cctatgggcggtttgt 87
>36182_der-mir-92a:mirbase
Length = 90
Score = 111 bits (56), Expect = 9e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 11 cccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcacttgtcccgg 70
||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 12 cccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgcacttgtcccgg 71
Query: 71 cctatgggcggcttgt 86
||||||||||| ||||
Sbjct: 72 cctatgggcggtttgt 87
>36379_dme-mir-92a:mirbase
Length = 95
Score = 111 bits (56), Expect = 9e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 11 cccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcacttgtcccgg 70
||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 12 cccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgcacttgtcccgg 71
Query: 71 cctatgggcggcttgt 86
||||||||||| ||||
Sbjct: 72 cctatgggcggtttgt 87
>36380_dme-mir-92a:mirbase
Length = 95
Score = 111 bits (56), Expect = 9e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 11 cccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcacttgtcccgg 70
||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 12 cccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgcacttgtcccgg 71
Query: 71 cctatgggcggcttgt 86
||||||||||| ||||
Sbjct: 72 cctatgggcggtttgt 87
>37142_dse-mir-92a:mirbase
Length = 90
Score = 111 bits (56), Expect = 9e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 11 cccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcacttgtcccgg 70
||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 12 cccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgcacttgtcccgg 71
Query: 71 cctatgggcggcttgt 86
||||||||||| ||||
Sbjct: 72 cctatgggcggtttgt 87
>37217_dsi-mir-92a:mirbase
Length = 90
Score = 111 bits (56), Expect = 9e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 11 cccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcacttgtcccgg 70
||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 12 cccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgcacttgtcccgg 71
Query: 71 cctatgggcggcttgt 86
||||||||||| ||||
Sbjct: 72 cctatgggcggtttgt 87
>36270_dgr-mir-92a:mirbase
Length = 87
Score = 95.6 bits (48), Expect = 5e-21
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 16 aggacgggaaggtgtcaacgttttaaattttgaa-caaacattgcacttgtcccggccta 74
|||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 14 aggacgggaaggtgtcaacgttttgcattttgaatcaaacattgcacttgtcccggccta 73
Query: 75 tgggcggcttgt 86
|| |||| ||||
Sbjct: 74 tgagcggtttgt 85
>36780_dmo-mir-92a:mirbase
Length = 89
Score = 85.7 bits (43), Expect = 5e-18
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 16 aggacgggaaggtgtcaacgttttaaattttgaa-caaacattgcacttgtcccggccta 74
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 16 aggacgggaaggtgtcaacgttttaccttttgattcaaacattgcacttgtcccggccta 75
Query: 75 tgggcgg 81
|| ||||
Sbjct: 76 tgagcgg 82
>36104_dan-mir-92a:mirbase
Length = 87
Score = 83.8 bits (42), Expect = 2e-17
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 11 cccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcacttgtcccgg 70
||||||||||||||||||||||| ||||| |||| | ||||||||||||||||||||
Sbjct: 11 cccgtaggacgggaaggtgtcaaggttttgaattaa-attaaacattgcacttgtcccgg 69
Query: 71 cctatgggcggcttgtca 88
||||||||||| ||||||
Sbjct: 70 cctatgggcggtttgtca 87
>37435_dwi-mir-92a:mirbase
Length = 81
Score = 83.8 bits (42), Expect = 2e-17
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 13 cgtaggacgggaaggtgtcaacgttttaaattttgaa-caaacattgcacttgtcccggc 71
||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||
Sbjct: 8 cgtaggacgggaaggtgtcaacgttttgccttatgaatcaaacattgcacttgtcccggc 67
Query: 72 ctatgggcgg 81
||||| ||||
Sbjct: 68 ctatgagcgg 77
>37356_dvi-mir-92a:mirbase
Length = 81
Score = 77.8 bits (39), Expect = 1e-15
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 16 aggacgggaaggtgtcaacgttttaaattttgaa-caaacattgcacttgtcccggccta 74
|||||||||||||||||||||||| || |||| |||||||||||||||||||||||||
Sbjct: 11 aggacgggaaggtgtcaacgttttgctttatgaatcaaacattgcacttgtcccggccta 70
Query: 75 tgggcgg 81
|| ||||
Sbjct: 71 tgagcgg 77
>34873_sko-mir-92a:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 48 aacaaacattgcacttgtcccggccta 74
|||||| ||||||||||||||||||||
Sbjct: 55 aacaaatattgcacttgtcccggccta 81
>35188_aae-mir-92a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctatg 76
||||||||||||||||||||||
Sbjct: 53 attgcacttgtcccggcctatg 74
>35286_aga-mir-92a:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctatg 76
||||||||||||||||||||||
Sbjct: 52 attgcacttgtcccggcctatg 73
>36018_cqu-mir-92-1:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctatg 76
||||||||||||||||||||||
Sbjct: 55 attgcacttgtcccggcctatg 76
>36019_cqu-mir-92-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctatg 76
||||||||||||||||||||||
Sbjct: 52 attgcacttgtcccggcctatg 73
>24667_bfl-mir-92a-2:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 49 acaaacattgcacttgtcccggcct 73
||||| |||||||||||||||||||
Sbjct: 52 acaaatattgcacttgtcccggcct 76
>24668_bfl-mir-92a-3:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 49 acaaacattgcacttgtcccggcct 73
||||| |||||||||||||||||||
Sbjct: 52 acaaatattgcacttgtcccggcct 76
>35363_ame-mir-92a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctat 75
|||||||||||||||||||||
Sbjct: 64 attgcacttgtcccggcctat 84
>37577_ngi-mir-92a:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctat 75
|||||||||||||||||||||
Sbjct: 58 attgcacttgtcccggcctat 78
>37609_nlo-mir-92a:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctat 75
|||||||||||||||||||||
Sbjct: 58 attgcacttgtcccggcctat 78
>37647_nvi-mir-92a:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctat 75
|||||||||||||||||||||
Sbjct: 63 attgcacttgtcccggcctat 83
>25748_xtr-mir-92a-2:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggcctatggg 78
||||||||||||||||||| ||||
Sbjct: 47 attgcacttgtcccggcctgtggg 70
>34818_spu-mir-92a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 attgcacttgtcccggccta 74
||||||||||||||||||||
Sbjct: 62 attgcacttgtcccggccta 81
