miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37226_dsi-mir-193:mirbase
Length = 120
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 5 cccattatagttgggattttttagatcagcagttattgctatacagccgtattaataaat 64
|||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||
Sbjct: 12 cccattatggttgggattttttagatcagcagttattgctatatagccatatttataaat 71
Query: 65 cttctactggcctactaagtcccaacataatgagagta 102
||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cttctactggcctactaagtcccaacataatgagagta 109
>36397_dme-mir-193:mirbase
Length = 108
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 8 attatagttgggattttttagatcagcagttattgctatacagccgtattaataaatctt 67
||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 12 attatggttgggattttttagatcagcagttattgctatatagccatatttataaatctt 71
Query: 68 ctactggcctactaagtcccaacataatgagagta 102
|||||||||||||||||||||||||||||||||||
Sbjct: 72 ctactggcctactaagtcccaacataatgagagta 106
>36398_dme-mir-193:mirbase
Length = 108
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 8 attatagttgggattttttagatcagcagttattgctatacagccgtattaataaatctt 67
||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 12 attatggttgggattttttagatcagcagttattgctatatagccatatttataaatctt 71
Query: 68 ctactggcctactaagtcccaacataatgagagta 102
|||||||||||||||||||||||||||||||||||
Sbjct: 72 ctactggcctactaagtcccaacataatgagagta 106
>35198_aae-mir-193:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 ctactggcctactaagtcccaac 90
|||||||||||||||||||||||
Sbjct: 71 ctactggcctactaagtcccaac 93
