miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36941_dps-mir-210b:mirbase
Length = 109
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 1 ggtacttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ggtacttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtg 35
Query: 61 acagcggctattgtaagaggccatattagcatca 94
||||||||||||||||||||||||||||||||||
Sbjct: 34 acagcggctattgtaagaggccatattagcatca 1
>36863_dpe-mir-210:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 ggtacttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtacttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtg 60
Query: 61 acagcggctattgtaagaggccat 84
||||||||||||||||||||||||
Sbjct: 61 acagcggctattgtaagaggccat 84
>37517_dya-mir-210:mirbase
Length = 86
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 1 ggtacttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3 ggtacttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtg 62
Query: 61 acagcggctattgtaagaggccat 84
||||||||||||||||||||||||
Sbjct: 63 acagcggctattgtaagaggccat 86
>37442_dwi-mir-210:mirbase
Length = 86
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 1 ggtacttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3 ggtacttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtg 62
Query: 61 acagcggctattgtaagaggcca 83
|||||||||||||||||||||||
Sbjct: 63 acagcggctattgtaagaggcca 85
>36399_dme-mir-210:mirbase
Length = 100
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 8 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 67
Query: 65 cggctattgtaagaggccata 85
|||||||||||||||||||||
Sbjct: 68 cggctattgtaagaggccata 88
>36400_dme-mir-210:mirbase
Length = 100
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 8 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 67
Query: 65 cggctattgtaagaggccata 85
|||||||||||||||||||||
Sbjct: 68 cggctattgtaagaggccata 88
>36111_dan-mir-210:mirbase
Length = 86
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 66
Query: 65 cggctattgtaagaggccat 84
||||||||||||||||||||
Sbjct: 67 cggctattgtaagaggccat 86
>36189_der-mir-210:mirbase
Length = 86
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 66
Query: 65 cggctattgtaagaggccat 84
||||||||||||||||||||
Sbjct: 67 cggctattgtaagaggccat 86
>37149_dse-mir-210:mirbase
Length = 86
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 66
Query: 65 cggctattgtaagaggccat 84
||||||||||||||||||||
Sbjct: 67 cggctattgtaagaggccat 86
>37227_dsi-mir-210:mirbase
Length = 86
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7 cttattgcagctgctggccactgcacaagattagacttaagactcttgtgcgtgtgacag 66
Query: 65 cggctattgtaagaggccat 84
||||||||||||||||||||
Sbjct: 67 cggctattgtaagaggccat 86
>37363_dvi-mir-210:mirbase
Length = 84
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 ggtacttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtg 60
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 ggtacttattgcagctgctggccactgcacaagattagactcaagactcttgtgcgtgtg 60
Query: 61 acagcggctattgtaagag 79
|||||||||||||||||||
Sbjct: 61 acagcggctattgtaagag 79
>36787_dmo-mir-210:mirbase
Length = 86
Score = 133 bits (67), Expect = 2e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 5 cttattgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacag 64
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 7 cttattgcagctgctggccactgcacaagattagactcaagactcttgtgcgtgtgacag 66
Query: 65 cggctattgtaagaggcca 83
|||||||||||||| ||||
Sbjct: 67 cggctattgtaagatgcca 85
>36278_dgr-mir-210:mirbase
Length = 86
Score = 115 bits (58), Expect = 6e-27
Identities = 73/77 (94%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 5 cttattgcagctgctggccactgcacaagattagatttaa--gactcttgtgcgtgtgac 62
||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 5 cttattggagctgctggccactgcacaagattagattcaaaagactcttgtgcgtgtgac 64
Query: 63 agcggctattgtaagag 79
|||||||||||||||||
Sbjct: 65 agcggctattgtaagag 81
>35374_ame-mir-210:mirbase
Length = 85
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 10 tgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacagcggct 69
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11 tgcagctgctggccactgcacaagattagacataagactcttgtgcgtgtgacagcggct 70
Query: 70 at 71
||
Sbjct: 71 at 72
>37582_ngi-mir-210:mirbase
Length = 85
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 10 tgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacagcggct 69
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11 tgcagctgctggccactgcacaagattagacataagactcttgtgcgtgtgacagcggct 70
Query: 70 at 71
||
Sbjct: 71 at 72
>37655_nvi-mir-210:mirbase
Length = 85
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 10 tgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacagcggct 69
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11 tgcagctgctggccactgcacaagattagacataagactcttgtgcgtgtgacagcggct 70
Query: 70 at 71
||
Sbjct: 71 at 72
>35199_aae-mir-210:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 8e-20
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 8 attgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacagcgg 67
||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||
Sbjct: 4 attgcagctgctgaccactgcacaagattaga-ttatgactcttgtgcgtgtgacaacgg 62
Query: 68 ctattg 73
||||||
Sbjct: 63 ctattg 68
>36028_cqu-mir-210:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 8e-20
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 8 attgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacagcgg 67
||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||
Sbjct: 4 attgcagctgctgaccactgcacaagattaga-ttatgactcttgtgcgtgtgacaacgg 62
Query: 68 ctattg 73
||||||
Sbjct: 63 ctattg 68
>35543_bmo-mir-210:mirbase
Length = 92
Score = 79.8 bits (40), Expect = 3e-16
Identities = 60/66 (90%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 11 gcagctgctggccactgcacaagattag---atttaagactcttgtgcgtgtgacagcgg 67
|||||||||||||||||||||||||||| | || | ||||||||||||||||||||||
Sbjct: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
Query: 68 ctattg 73
||||||
Sbjct: 74 ctattg 79
>37753_tca-mir-210:mirbase
Length = 76
Score = 75.8 bits (38), Expect = 5e-15
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 10 tgcagctgctggccactgcacaagattagat---ttaagactcttgtgcgtgtgacagcg 66
|||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 6 tgcagctgctggacgctgcacaagattagatattttagaactcttgtgcgtgtgacagcg 65
Query: 67 gctattgt 74
||||||||
Sbjct: 66 gctattgt 73
>37754_tca-mir-210:mirbase
Length = 76
Score = 75.8 bits (38), Expect = 5e-15
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 10 tgcagctgctggccactgcacaagattagat---ttaagactcttgtgcgtgtgacagcg 66
|||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 6 tgcagctgctggacgctgcacaagattagatattttagaactcttgtgcgtgtgacagcg 65
Query: 67 gctattgt 74
||||||||
Sbjct: 66 gctattgt 73
>35295_aga-mir-210:mirbase
Length = 80
Score = 73.8 bits (37), Expect = 2e-14
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 8 attgcagctgctggccactgcacaagattagatttaagactcttgtgcgtgtgacagcgg 67
||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 8 attgcagctgctgaccactgcacaagattaga-atgcgactcttgtgcgtgtgacaacgg 66
Query: 68 ctatt 72
|||||
Sbjct: 67 ctatt 71
>37564_lmi-mir-210:mirbase
Length = 62
Score = 69.9 bits (35), Expect = 3e-13
Identities = 57/62 (91%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 13 agctgctggccactgcacaagattag--atttaa-gactcttgtgcgtgtgacagcggct 69
||||||||| |||||||||||||||| ||| || |||||||||||||||||||||||||
Sbjct: 1 agctgctggacactgcacaagattagcgattaaaagactcttgtgcgtgtgacagcggct 60
Query: 70 at 71
||
Sbjct: 61 at 62
>25831_xtr-mir-210:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgtgcgtgtgacagcggcta 70
||||||||||||||||||||
Sbjct: 57 tgtgcgtgtgacagcggcta 76
>27426_mdo-mir-210:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgtgcgtgtgacagcggcta 70
||||||||||||||||||||
Sbjct: 50 tgtgcgtgtgacagcggcta 69
>34366_dre-mir-210:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgtgcgtgtgacagcggcta 70
||||||||||||||||||||
Sbjct: 49 tgtgcgtgtgacagcggcta 68
>34634_fru-mir-210:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgtgcgtgtgacagcggcta 70
||||||||||||||||||||
Sbjct: 56 tgtgcgtgtgacagcggcta 75
>34782_tni-mir-210:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgtgcgtgtgacagcggcta 70
||||||||||||||||||||
Sbjct: 48 tgtgcgtgtgacagcggcta 67
