miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36940_dps-mir-210a:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 1 tgatgctaatatggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tgatgctaatatggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaa 35
Query: 61 tcttgtgcagtggccagcagctgcaataagtacc 94
||||||||||||||||||||||||||||||||||
Sbjct: 34 tcttgtgcagtggccagcagctgcaataagtacc 1
>36863_dpe-mir-210:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 11 atggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcag 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcag 25
Query: 71 tggccagcagctgcaataagtacc 94
||||||||||||||||||||||||
Sbjct: 24 tggccagcagctgcaataagtacc 1
>37442_dwi-mir-210:mirbase
Length = 86
Score = 159 bits (80), Expect = 5e-40
Identities = 83/84 (98%)
Strand = Plus / Minus
Query: 12 tggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagt 71
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 85 tggcctcttacaatagccgctgtcacacgcacaagagtcttaagtctaatcttgtgcagt 26
Query: 72 ggccagcagctgcaataagtaccg 95
||||||||||||||||||||||||
Sbjct: 25 ggccagcagctgcaataagtaccg 2
>37517_dya-mir-210:mirbase
Length = 86
Score = 159 bits (80), Expect = 5e-40
Identities = 83/84 (98%)
Strand = Plus / Minus
Query: 11 atggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcag 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 86 atggcctcttacaatagccgctgtcacacgcacaagagtcttaagtctaatcttgtgcag 27
Query: 71 tggccagcagctgcaataagtacc 94
||||||||||||||||||||||||
Sbjct: 26 tggccagcagctgcaataagtacc 3
>36111_dan-mir-210:mirbase
Length = 86
Score = 153 bits (77), Expect = 3e-38
Identities = 83/85 (97%)
Strand = Plus / Minus
Query: 11 atggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcag 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 86 atggcctcttacaatagccgctgtcacacgcacaagagtcttaagtctaatcttgtgcag 27
Query: 71 tggccagcagctgcaataagtaccg 95
|||||||||||||||||||| ||||
Sbjct: 26 tggccagcagctgcaataagcaccg 2
>36399_dme-mir-210:mirbase
Length = 100
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 10 tatggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgca 69
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 88 tatggcctcttacaatagccgctgtcacacgcacaagagtcttaagtctaatcttgtgca 29
Query: 70 gtggccagcagctgcaataag 90
|||||||||||||||||||||
Sbjct: 28 gtggccagcagctgcaataag 8
>36400_dme-mir-210:mirbase
Length = 100
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 10 tatggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgca 69
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 88 tatggcctcttacaatagccgctgtcacacgcacaagagtcttaagtctaatcttgtgca 29
Query: 70 gtggccagcagctgcaataag 90
|||||||||||||||||||||
Sbjct: 28 gtggccagcagctgcaataag 8
>36189_der-mir-210:mirbase
Length = 86
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Minus
Query: 11 atggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcag 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 86 atggcctcttacaatagccgctgtcacacgcacaagagtcttaagtctaatcttgtgcag 27
Query: 71 tggccagcagctgcaataag 90
||||||||||||||||||||
Sbjct: 26 tggccagcagctgcaataag 7
>37149_dse-mir-210:mirbase
Length = 86
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Minus
Query: 11 atggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcag 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 86 atggcctcttacaatagccgctgtcacacgcacaagagtcttaagtctaatcttgtgcag 27
Query: 71 tggccagcagctgcaataag 90
||||||||||||||||||||
Sbjct: 26 tggccagcagctgcaataag 7
>37227_dsi-mir-210:mirbase
Length = 86
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Minus
Query: 11 atggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcag 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 86 atggcctcttacaatagccgctgtcacacgcacaagagtcttaagtctaatcttgtgcag 27
Query: 71 tggccagcagctgcaataag 90
||||||||||||||||||||
Sbjct: 26 tggccagcagctgcaataag 7
>37363_dvi-mir-210:mirbase
Length = 84
Score = 141 bits (71), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Minus
Query: 16 ctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagtggcc 75
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 79 ctcttacaatagccgctgtcacacgcacaagagtcttgagtctaatcttgtgcagtggcc 20
Query: 76 agcagctgcaataagtacc 94
|||||||||||||||||||
Sbjct: 19 agcagctgcaataagtacc 1
>36787_dmo-mir-210:mirbase
Length = 86
Score = 135 bits (68), Expect = 7e-33
Identities = 80/84 (95%)
Strand = Plus / Minus
Query: 12 tggcctcttacaatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagt 71
|||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 85 tggcatcttacaatagccgctgtcacacgcacaagagtcttgagtctaatcttgtgcagt 26
Query: 72 ggccagcagctgcaataagtaccg 95
||||||||||||||||||| ||||
Sbjct: 25 ggccagcagctgcaataagcaccg 2
>36278_dgr-mir-210:mirbase
Length = 86
Score = 115 bits (58), Expect = 7e-27
Identities = 73/77 (94%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 16 ctcttacaatagccgctgtcacacgcacaagagtc--ttaaatctaatcttgtgcagtgg 73
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 81 ctcttacaatagccgctgtcacacgcacaagagtcttttgaatctaatcttgtgcagtgg 22
Query: 74 ccagcagctgcaataag 90
||||||||| |||||||
Sbjct: 21 ccagcagctccaataag 5
>35374_ame-mir-210:mirbase
Length = 85
Score = 107 bits (54), Expect = 2e-24
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 24 atagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagtggccagcagctg 83
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 72 atagccgctgtcacacgcacaagagtcttatgtctaatcttgtgcagtggccagcagctg 13
Query: 84 ca 85
||
Sbjct: 12 ca 11
>37582_ngi-mir-210:mirbase
Length = 85
Score = 107 bits (54), Expect = 2e-24
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 24 atagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagtggccagcagctg 83
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 72 atagccgctgtcacacgcacaagagtcttatgtctaatcttgtgcagtggccagcagctg 13
Query: 84 ca 85
||
Sbjct: 12 ca 11
>37655_nvi-mir-210:mirbase
Length = 85
Score = 107 bits (54), Expect = 2e-24
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 24 atagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagtggccagcagctg 83
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 72 atagccgctgtcacacgcacaagagtcttatgtctaatcttgtgcagtggccagcagctg 13
Query: 84 ca 85
||
Sbjct: 12 ca 11
>35199_aae-mir-210:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 1e-19
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 22 caatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagtggccagcagc 81
||||||||| ||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 68 caatagccgttgtcacacgcacaagagtcataa-tctaatcttgtgcagtggtcagcagc 10
Query: 82 tgcaat 87
||||||
Sbjct: 9 tgcaat 4
>36028_cqu-mir-210:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 1e-19
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 22 caatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagtggccagcagc 81
||||||||| ||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 68 caatagccgttgtcacacgcacaagagtcataa-tctaatcttgtgcagtggtcagcagc 10
Query: 82 tgcaat 87
||||||
Sbjct: 9 tgcaat 4
>35543_bmo-mir-210:mirbase
Length = 92
Score = 79.8 bits (40), Expect = 4e-16
Identities = 60/66 (90%), Gaps = 3/66 (4%)
Strand = Plus / Minus
Query: 22 caatagccgctgtcacacgcacaagagtcttaaat---ctaatcttgtgcagtggccagc 78
|||||||||||||||||||||||||||| | || | ||||||||||||||||||||||
Sbjct: 79 caatagccgctgtcacacgcacaagagtataaacttgactaatcttgtgcagtggccagc 20
Query: 79 agctgc 84
||||||
Sbjct: 19 agctgc 14
>37753_tca-mir-210:mirbase
Length = 76
Score = 75.8 bits (38), Expect = 6e-15
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Minus
Query: 21 acaatagccgctgtcacacgcacaagagtcttaa---atctaatcttgtgcagtggccag 77
||||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||
Sbjct: 73 acaatagccgctgtcacacgcacaagagttctaaaatatctaatcttgtgcagcgtccag 14
Query: 78 cagctgca 85
||||||||
Sbjct: 13 cagctgca 6
>37754_tca-mir-210:mirbase
Length = 76
Score = 75.8 bits (38), Expect = 6e-15
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Minus
Query: 21 acaatagccgctgtcacacgcacaagagtcttaa---atctaatcttgtgcagtggccag 77
||||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||
Sbjct: 73 acaatagccgctgtcacacgcacaagagttctaaaatatctaatcttgtgcagcgtccag 14
Query: 78 cagctgca 85
||||||||
Sbjct: 13 cagctgca 6
>35295_aga-mir-210:mirbase
Length = 80
Score = 73.8 bits (37), Expect = 2e-14
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 23 aatagccgctgtcacacgcacaagagtcttaaatctaatcttgtgcagtggccagcagct 82
|||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 71 aatagccgttgtcacacgcacaagagtcgcat-tctaatcttgtgcagtggtcagcagct 13
Query: 83 gcaat 87
|||||
Sbjct: 12 gcaat 8
>37564_lmi-mir-210:mirbase
Length = 62
Score = 69.9 bits (35), Expect = 4e-13
Identities = 57/62 (91%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 24 atagccgctgtcacacgcacaagagtc-ttaaat--ctaatcttgtgcagtggccagcag 80
||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||
Sbjct: 62 atagccgctgtcacacgcacaagagtcttttaatcgctaatcttgtgcagtgtccagcag 3
Query: 81 ct 82
||
Sbjct: 2 ct 1
>25831_xtr-mir-210:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 25 tagccgctgtcacacgcaca 44
||||||||||||||||||||
Sbjct: 76 tagccgctgtcacacgcaca 57
>27426_mdo-mir-210:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 25 tagccgctgtcacacgcaca 44
||||||||||||||||||||
Sbjct: 69 tagccgctgtcacacgcaca 50
>34366_dre-mir-210:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 25 tagccgctgtcacacgcaca 44
||||||||||||||||||||
Sbjct: 68 tagccgctgtcacacgcaca 49
>34634_fru-mir-210:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 25 tagccgctgtcacacgcaca 44
||||||||||||||||||||
Sbjct: 75 tagccgctgtcacacgcaca 56
>34782_tni-mir-210:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 25 tagccgctgtcacacgcaca 44
||||||||||||||||||||
Sbjct: 67 tagccgctgtcacacgcaca 48
