miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36877_dpe-mir-282:mirbase
Length = 91
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 tgccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagaca 60
Query: 61 tagcctataagaggttaggtgtaccaaggaa 91
|||||||||||||||||||||||||||||||
Sbjct: 61 tagcctataagaggttaggtgtaccaaggaa 91
>36203_der-mir-282:mirbase
Length = 97
Score = 141 bits (71), Expect = 1e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 6 ccttataaatctagcctctactaggctttgtctgtgcattc-aaaagccgatcagacata 64
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||||||||||||||||||||||||
Sbjct: 65 gcctataagaggttaggtgtaccaagg 91
>36428_dme-mir-282:mirbase
Length = 97
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
|||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 6 ccttctaaatctagcctctactaggctttgtctgtgcattcgaaagcc-gatcagacata 64
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||||||||||||||||||||||||
Sbjct: 65 gcctataagaggttaggtgtaccaagg 91
>36429_dme-mir-282:mirbase
Length = 97
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
|||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 6 ccttctaaatctagcctctactaggctttgtctgtgcattcgaaagcc-gatcagacata 64
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||||||||||||||||||||||||
Sbjct: 65 gcctataagaggttaggtgtaccaagg 91
>37163_dse-mir-282:mirbase
Length = 97
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
|||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 6 ccttttaaatctagcctctactaggctttgtctgtgcattcgaaagcc-gatcagacata 64
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||||||||||||||||||||||||
Sbjct: 65 gcctataagaggttaggtgtaccaagg 91
>37239_dsi-mir-282:mirbase
Length = 97
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
|||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 6 ccttttaaatctagcctctactaggctttgtctgtgcattcgaaagcc-gatcagacata 64
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||||||||||||||||||||||||
Sbjct: 65 gcctataagaggttaggtgtaccaagg 91
>37532_dya-mir-282:mirbase
Length = 90
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 3 ccttataaatctagcctctactaggctttgtctgtgcatacgaaagcc-gatcagacata 61
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||||||||||||||||||||||||
Sbjct: 62 gcctataagaggttaggtgtaccaagg 88
>36125_dan-mir-282:mirbase
Length = 90
Score = 125 bits (63), Expect = 6e-30
Identities = 82/87 (94%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
||||||| |||||||||||||||||||||||||||||||| |||| | |||||||||||
Sbjct: 3 ccttatagatctagcctctactaggctttgtctgtgcattcgaaagtc-gatcagacata 61
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||||||||||||||||||||||||
Sbjct: 62 gcctataagaggttaggtgtaccaagg 88
>36800_dmo-mir-282:mirbase
Length = 91
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
|||||||||||||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct: 4 ccttataaatctagcctctactaggctttgtctgtgcatttg-atataagatcagacata 62
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||| |||||||||||||| |||||
Sbjct: 63 gcctatgagaggttaggtgtagcaagg 89
>37377_dvi-mir-282:mirbase
Length = 94
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
|||||||||||||||||||||||||||||||||||||||| | | | || |||||||||
Sbjct: 6 ccttataaatctagcctctactaggctttgtctgtgcattcg-atatacggtcagacata 64
Query: 63 gcctataagaggttaggtgtaccaagg 89
|||||| ||||||||||||||||||||
Sbjct: 65 gcctatgagaggttaggtgtaccaagg 91
>37456_dwi-mir-282:mirbase
Length = 87
Score = 105 bits (53), Expect = 6e-24
Identities = 79/88 (89%), Gaps = 6/88 (6%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
|||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 4 ccttataaatctagcctctactaggctttgtctgtgcatttgga------ttcagacata 57
Query: 63 gcctataagaggttaggtgtaccaagga 90
|||||| |||||||||||||||||||||
Sbjct: 58 gcctatgagaggttaggtgtaccaagga 85
>36292_dgr-mir-282:mirbase
Length = 94
Score = 93.7 bits (47), Expect = 2e-20
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 3 ccttataaatctagcctctactaggctttgtctgtgca-tttgaaaacccgatcagacat 61
|||||||||||||||||||||||||||||||||||||| ||| || | |||||||||
Sbjct: 3 ccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagacat 62
Query: 62 agcctataagaggttaggtgtac 84
||||||| |||||||||||||||
Sbjct: 63 agcctatgagaggttaggtgtac 85
>35211_aae-mir-282-1:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 aatctagcctctactaggctttgtctgt 37
|||||||||||| |||||||||||||||
Sbjct: 29 aatctagcctctcctaggctttgtctgt 56
>35212_aae-mir-282-2:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 aatctagcctctactaggctttgtctgt 37
|||||||||||| |||||||||||||||
Sbjct: 29 aatctagcctctcctaggctttgtctgt 56
>35306_aga-mir-282:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 aatctagcctctactaggctttgtctgt 37
|||||||||||| |||||||||||||||
Sbjct: 12 aatctagcctcttctaggctttgtctgt 39
>37783_tca-mir-282:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 tagcctctactaggctttgtctgtgcatttg 44
|||||||| |||||||||||||||| |||||
Sbjct: 9 tagcctctcctaggctttgtctgtgaatttg 39
>37784_tca-mir-282:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 tagcctctactaggctttgtctgtgcatttg 44
|||||||| |||||||||||||||| |||||
Sbjct: 9 tagcctctcctaggctttgtctgtgaatttg 39
>35387_ame-mir-282:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tagcctctactaggctttgtctgt 37
|||||||| |||||||||||||||
Sbjct: 19 tagcctctcctaggctttgtctgt 42
>37621_nlo-mir-282:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tagcctctactaggctttgtctgt 37
|||||||| |||||||||||||||
Sbjct: 6 tagcctctcctaggctttgtctgt 29
>37664_nvi-mir-282:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tagcctctactaggctttgtctgt 37
|||||||| |||||||||||||||
Sbjct: 19 tagcctctcctaggctttgtctgt 42
