miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36879_dpe-mir-284:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>36205_der-mir-284:mirbase
Length = 98
Score = 170 bits (86), Expect = 1e-43
Identities = 95/98 (96%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>37534_dya-mir-284:mirbase
Length = 98
Score = 170 bits (86), Expect = 1e-43
Identities = 95/98 (96%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>36127_dan-mir-284:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
>37165_dse-mir-284:mirbase
Length = 98
Score = 155 bits (78), Expect = 7e-39
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>37241_dsi-mir-284:mirbase
Length = 98
Score = 155 bits (78), Expect = 7e-39
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36432_dme-mir-284:mirbase
Length = 100
Score = 147 bits (74), Expect = 2e-36
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36433_dme-mir-284:mirbase
Length = 100
Score = 147 bits (74), Expect = 2e-36
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>37379_dvi-mir-284:mirbase
Length = 98
Score = 139 bits (70), Expect = 4e-34
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
>36294_dgr-mir-284:mirbase
Length = 98
Score = 119 bits (60), Expect = 4e-28
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||||||||||||||||||||||| | | |||||||| |||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggc 96
|| |||||||||||||||||||||||||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
>37458_dwi-mir-284:mirbase
Length = 99
Score = 109 bits (55), Expect = 4e-25
Identities = 89/99 (89%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctggga-aggcaaggcttgagcactg 59
||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgttaggggaaaggcttgagcattg 60
Query: 60 cttctgaagtcagcaacttgattccagcaattgcggccc 98
| | |||||||||||||||||||||||||||||||||
Sbjct: 61 catactaagtcagcaacttgattccagcaattgcggccc 99
>36802_dmo-mir-284:mirbase
Length = 98
Score = 91.7 bits (46), Expect = 9e-20
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
||||||||||||||||| ||||||||||||| ||||| | || ||||||| ||| |||
Sbjct: 1 gttgcagttcctggaataaagttgactgtgtcgcctgtaaggggaaggcttttgcattgc 60
Query: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
|| |||||||||||||||||||||||| ||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaactgcggccc 98
