miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36880_dpe-mir-286:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccagggttccgatcaagcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccagggttccgatcaagcgaa 60
Query: 61 gtgactagaccgaacactcgtgctataattttagaa 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgactagaccgaacactcgtgctataattttagaa 96
>37536_dya-mir-286:mirbase
Length = 98
Score = 101 bits (51), Expect = 9e-23
Identities = 86/95 (90%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt-accag-ggttccgatcaagcg 58
|||||||| |||||||| ||||||| ||||| |||||| | || |||| ||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaaagaggtttcgatcaagcg 60
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataatttta 95
>37167_dse-mir-286:mirbase
Length = 99
Score = 99.6 bits (50), Expect = 4e-22
Identities = 85/96 (88%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag---ggttccgatcaagc 57
|||||||| |||||||| ||||||| ||||| |||||| | | |||| |||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaataaaggtttcgatcaagc 60
Query: 58 gaagtgactagaccgaacactcgtgctataatttta 93
||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtgactagaccgaacactcgtgctataatttta 96
>36207_der-mir-286:mirbase
Length = 98
Score = 95.6 bits (48), Expect = 6e-21
Identities = 84/95 (88%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag--ggttccgatcaagcg 58
|||||||| |||||||| ||||||| ||||| |||||| || |||| ||||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaggtttcgatcgagcg 60
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataatttta 95
>37243_dsi-mir-286:mirbase
Length = 100
Score = 95.6 bits (48), Expect = 6e-21
Identities = 85/97 (87%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccagg----gttccgatcaag 56
|||||||| |||||||| ||||||| ||||| |||||| | | | ||| ||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
Query: 57 cgaagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaagtgactagaccgaacactcgtgctataatttta 97
>36436_dme-mir-286:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 9e-20
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag---ggttccgatcaagc 57
|||||||| |||||||| ||||||| ||||| |||||| || |||| |||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
Query: 58 gaagtgactagaccgaacactcgtgctataatttta 93
||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtgactagaccgaacactcgtgctataatttta 96
>36437_dme-mir-286:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 9e-20
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag---ggttccgatcaagc 57
|||||||| |||||||| ||||||| ||||| |||||| || |||| |||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
Query: 58 gaagtgactagaccgaacactcgtgctataatttta 93
||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtgactagaccgaacactcgtgctataatttta 96
>36129_dan-mir-286:mirbase
Length = 103
Score = 83.8 bits (42), Expect = 2e-17
Identities = 85/100 (85%), Gaps = 7/100 (7%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttttaccag-------ggttccgatc 53
|||||||| |||||||||||||||| |||||||||||| || |||| | | |
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttcacaaaaaaattggttaccaac 60
Query: 54 aagcgaagtgactagaccgaacactcgtgctataatttta 93
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcgaagtgactagaccgaacactcgtgctataatttta 100
>36296_dgr-mir-286-1:mirbase
Length = 104
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataatttta 101
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttt 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36297_dgr-mir-286-2:mirbase
Length = 104
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataatttta 101
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgctttt 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36804_dmo-mir-286:mirbase
Length = 103
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataatttta 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt 38
||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctcttttt 38
>37381_dvi-mir-286:mirbase
Length = 101
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 64 aagtgactagaccgaacactcgtgctataatttta 98
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt 38
||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttt 38
>37460_dwi-mir-286:mirbase
Length = 108
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 59 aagtgactagaccgaacactcgtgctataatttta 93
|||||||||||||||||||||||||||||||||||
Sbjct: 73 aagtgactagaccgaacactcgtgctataatttta 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 3 aaaattaaatggcgattgtcggtttggtcgcttttt 38
|||||| |||||||||||||||| | ||| ||||||
Sbjct: 1 aaaattgaatggcgattgtcggtatagtctcttttt 36
>35216_aae-mir-286b-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 agtgactagaccgaacactcgt 81
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35217_aae-mir-286b-2:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 agtgactagaccgaacactcgt 81
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35215_aae-mir-286a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 agtgactagaccgaacactcg 80
|||||||||||||||||||||
Sbjct: 61 agtgactagaccgaacactcg 81
>35308_aga-mir-286:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 agtgactagaccgaacactcg 80
|||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcg 79
