miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36883_dpe-mir-289:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 2 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 60
Query: 62 gggctaactcacttgagcgtttgttggcacgtaaaag 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggctaactcacttgagcgtttgttggcacgtaaaag 97
>36210_der-mir-289:mirbase
Length = 96
Score = 97.6 bits (49), Expect = 1e-21
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 2 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 61
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactcc-agtccctctgacggact 59
Query: 62 gggctaactcacttgagcgtttgttggcacgtaaaag 98
||| |||||||||||||||||||||||||||||||||
Sbjct: 60 ggggtaactcacttgagcgtttgttggcacgtaaaag 96
>36440_dme-mir-289:mirbase
Length = 99
Score = 95.6 bits (48), Expect = 6e-21
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 gagtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgac 60
||||||||||| ||||||||||||||||||||||||||||| | ||| || | |||
Sbjct: 1 gagtttacagtaaaataaatatttaagtggagcctgcgact-tcagtccctctgactgac 59
Query: 61 tgggctaactcacttgagcgtttgttggcacgtaaaagac 100
|||| ||| |||||||||||||||||||||||||||||||
Sbjct: 60 tggggtaagtcacttgagcgtttgttggcacgtaaaagac 99
>37170_dse-mir-289:mirbase
Length = 96
Score = 89.7 bits (45), Expect = 4e-19
Identities = 85/97 (87%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 2 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 61
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgact 59
Query: 62 gggctaactcacttgagcgtttgttggcacgtaaaag 98
||| ||| |||||||||||||||||||||||||||||
Sbjct: 60 ggggtaagtcacttgagcgtttgttggcacgtaaaag 96
>37246_dsi-mir-289:mirbase
Length = 96
Score = 89.7 bits (45), Expect = 4e-19
Identities = 85/97 (87%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 2 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 61
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgact 59
Query: 62 gggctaactcacttgagcgtttgttggcacgtaaaag 98
||| ||| |||||||||||||||||||||||||||||
Sbjct: 60 ggggtaagtcacttgagcgtttgttggcacgtaaaag 96
>36132_dan-mir-289:mirbase
Length = 117
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 gagtttacagtgaaataaatatttaagtggagcctgcgact 41
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gagtttacagtaaaataaatatttaagtggagcctgcgact 41
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 70 tcacttgagcgtttgttggcacgtaaaagac 100
|||||||||||||||||||||||||||||||
Sbjct: 87 tcacttgagcgtttgttggcacgtaaaagac 117
>37539_dya-mir-289:mirbase
Length = 96
Score = 73.8 bits (37), Expect = 2e-14
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 2 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 61
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgact 59
Query: 62 gggctaactcacttgagcgtttgttggcacgtaaaag 98
||| ||| || || |||||||||||||||||||||||
Sbjct: 60 ggggtaagtctctcgagcgtttgttggcacgtaaaag 96
