miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36890_dpe-mir-315:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
Query: 61 gcaattatcaaagccaaataagtg 84
||||||||||||||||||||||||
Sbjct: 61 gcaattatcaaagccaaataagtg 84
>37258_dsi-mir-315:mirbase
Length = 84
Score = 89.7 bits (45), Expect = 3e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||| || |||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagcccttattgtttaccagttggctttcga 60
Query: 61 gcaat 65
|||||
Sbjct: 61 gcaat 65
>36467_dme-mir-315:mirbase
Length = 84
Score = 81.8 bits (41), Expect = 7e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||| || ||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccctcattgtttaccagttggctttcga 60
Query: 61 gcaat 65
|||||
Sbjct: 61 gcaat 65
>36468_dme-mir-315:mirbase
Length = 84
Score = 81.8 bits (41), Expect = 7e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||| || ||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccctcattgtttaccagttggctttcga 60
Query: 61 gcaat 65
|||||
Sbjct: 61 gcaat 65
>36144_dan-mir-315:mirbase
Length = 84
Score = 79.8 bits (40), Expect = 3e-16
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||| || |||||||||||||||||||||||||||||| | | || ||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagcccttataaattattagctggctttcga 60
Query: 61 gcaattatcaaagccaaataagtg 84
||||| || || |||||||||||
Sbjct: 61 gcaataattgaaaccaaataagtg 84
>37182_dse-mir-315:mirbase
Length = 82
Score = 75.8 bits (38), Expect = 4e-15
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagcccttat--tgtaccagttggctttcga 58
Query: 61 gcaat 65
|||||
Sbjct: 59 gcaat 63
>37471_dwi-mir-315:mirbase
Length = 85
Score = 73.8 bits (37), Expect = 2e-14
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagccctta-taattaaccagttggctttcg 59
||||||| || ||||||||||||||||||||||||| | || || | |||||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccctcattactttatcagttggctttcg 60
Query: 60 agcaattatcaaagccaaataagtg 84
|||||| || || |||||||||||
Sbjct: 61 agcaataattgaaaccaaataagtg 85
>37551_dya-mir-315-1:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||| || ||||||||||||||||||||||||||| ||| | ||| ||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
Query: 61 gcaat 65
|||||
Sbjct: 61 gcaat 65
>37552_dya-mir-315-2:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||| || ||||||||||||||||||||||||||| ||| | ||| ||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
Query: 61 gcaat 65
|||||
Sbjct: 61 gcaat 65
>36226_der-mir-315:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
||||||| || |||||||||||||||||||||||| ||| || | ||| ||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccc-tattatctaacagctggctttcga 59
Query: 61 gcaat 65
|||||
Sbjct: 60 gcaat 64
>38775_cte-mir-315:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagccctt 37
||||||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagccctt 46
>36815_dmo-mir-315:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 cttatctatttttgattgttgctcagaaagccc 35
||||| || ||||||||||||||||||||||||
Sbjct: 3 cttatataattttgattgttgctcagaaagccc 35
>37393_dvi-mir-315a:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagccct 36
|||||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagccct 36
>35031_dpu-mir-315:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tttttgattgttgctcagaaagcc 34
||||||||||||||||||||||||
Sbjct: 20 tttttgattgttgctcagaaagcc 43
>38885_lgi-mir-315:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagcc 43
>34896_sko-mir-315:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagcc 43
>35085_api-mir-315:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 1 ttttgattgttgctcagaaagcc 23
>35225_aae-mir-315:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 16 ttttgattgttgctcagaaagcc 38
>35314_aga-mir-315:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 8 ttttgattgttgctcagaaagcc 30
>35392_ame-mir-315:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>36045_cqu-mir-315:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 17 ttttgattgttgctcagaaagcc 39
>36309_dgr-mir-315:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>37623_nlo-mir-315:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>37668_nvi-mir-315:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>37798_tca-mir-315:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>25540_pma-mir-315:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tttgattgttgctcagaaagcc 34
||||||||||||||||||||||
Sbjct: 11 tttgattgttgctcagaaagcc 32
>34986_isc-mir-315:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaa 30
|||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaa 39
