miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36475_dme-mir-375:mirbase
          Length = 91

 Score =  101 bits (51), Expect = 8e-23
 Identities = 77/85 (90%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggcagcgaattacttgggccaggggaattcaaactgtgatcgcaatgcaaaaagtttgt 60
          |||||||||||||||||||||| |||||| ||||||||||||   || |  |||||||||
Sbjct: 3  gggcagcgaattacttgggccaagggaatgcaaactgtgatc---atcccgaaagtttgt 59

                                   
Query: 61 tcgtttggcttaagttattttcatg 85
          |||||||||||||||||||||||||
Sbjct: 60 tcgtttggcttaagttattttcatg 84




>36476_dme-mir-375:mirbase
          Length = 91

 Score =  101 bits (51), Expect = 8e-23
 Identities = 77/85 (90%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggcagcgaattacttgggccaggggaattcaaactgtgatcgcaatgcaaaaagtttgt 60
          |||||||||||||||||||||| |||||| ||||||||||||   || |  |||||||||
Sbjct: 3  gggcagcgaattacttgggccaagggaatgcaaactgtgatc---atcccgaaagtttgt 59

                                   
Query: 61 tcgtttggcttaagttattttcatg 85
          |||||||||||||||||||||||||
Sbjct: 60 tcgtttggcttaagttattttcatg 84




>37262_dsi-mir-375:mirbase
          Length = 120

 Score =  101 bits (51), Expect = 8e-23
 Identities = 77/85 (90%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggcagcgaattacttgggccaggggaattcaaactgtgatcgcaatgcaaaaagtttgt 60
          |||||||||||||||||||||| |||||| ||||||||||||   || |  |||||||||
Sbjct: 18 gggcagcgaattacttgggccaagggaatgcaaactgtgatc---atcccgaaagtttgt 74

                                   
Query: 61 tcgtttggcttaagttattttcatg 85
          |||||||||||||||||||||||||
Sbjct: 75 tcgtttggcttaagttattttcatg 99