miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36515_dme-mir-970:mirbase
Length = 95
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 1 ggcatctgttgcagctagcgggtgttttatctggtagctgtacccttttgaatctatcat 60
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 5 ggcatctgttgcagctagcgggtgttttatttggtagctgtaatgatttgaatctatcat 64
Query: 61 aagacacacgcggctatgaccg 82
||||||||||||||||| ||||
Sbjct: 65 aagacacacgcggctataaccg 86
>36516_dme-mir-970:mirbase
Length = 95
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 1 ggcatctgttgcagctagcgggtgttttatctggtagctgtacccttttgaatctatcat 60
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 5 ggcatctgttgcagctagcgggtgttttatttggtagctgtaatgatttgaatctatcat 64
Query: 61 aagacacacgcggctatgaccg 82
||||||||||||||||| ||||
Sbjct: 65 aagacacacgcggctataaccg 86
>37279_dsi-mir-970:mirbase
Length = 114
Score = 113 bits (57), Expect = 2e-26
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 1 ggcatctgttgcagctagcgggtgttttatctggtagctgtacccttttgaatctatcat 60
|||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||
Sbjct: 17 ggcatctgttgcagctagcgggtgttttatttggtagctgaattgatttgaatctatcat 76
Query: 61 aagacacacgcggctatgaccgatg 85
||||||||||||||||| |||||||
Sbjct: 77 aagacacacgcggctataaccgatg 101
>35575_bmo-mir-970:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 aatctatcataagacacacgcggct 75
|||||||||||||||||||||||||
Sbjct: 52 aatctatcataagacacacgcggct 76
>37815_tca-mir-970:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 ctatcataagacacacgcggctat 77
||||||||||||||||||||||||
Sbjct: 54 ctatcataagacacacgcggctat 77
>37816_tca-mir-970:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 ctatcataagacacacgcggctat 77
||||||||||||||||||||||||
Sbjct: 54 ctatcataagacacacgcggctat 77
>35236_aae-mir-970:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tatcataagacacacgcggctat 77
|||||||||||||||||||||||
Sbjct: 63 tatcataagacacacgcggctat 85
>35323_aga-mir-970:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tatcataagacacacgcggctat 77
|||||||||||||||||||||||
Sbjct: 62 tatcataagacacacgcggctat 84
>36052_cqu-mir-970:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tatcataagacacacgcggctat 77
|||||||||||||||||||||||
Sbjct: 52 tatcataagacacacgcggctat 74