miRNEST 2.0, an integrative microRNA resource :: BLAST
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 163 bits (82), Expect = 5e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 66 actgcattacttgcaagaaagtcacaaaatccattgcaagatcatacttgtggctttctt 125
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 17 actgcattacttgcaagaaagtcacaaaatcaattgcaggatcatacttgtggctttctt 76
Query: 126 gcaagttgtgcagttgttgcctcaagcttg 155
||||||||||||||||||||||||||||||
Sbjct: 77 gcaagttgtgcagttgttgcctcaagcttg 106
Score = 85.7 bits (43), Expect = 1e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 19 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 19 caagcatgaggcaggaactgcattacttgcaagaaagtcacaagta 64
||||| ||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 106 caagcttgaggcaacaactgcacaacttgcaagaaagccacaagta 61
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 139 bits (70), Expect = 8e-34
Identities = 86/90 (95%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 66 actgcattacttgcaagaaagtcacaaaatccattgcaagatcatacttgtggctttctt 125
||||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||||
Sbjct: 17 actgcattacttgcaagaaagtcacaaaatcaattgcagga-catacttgtggttttctt 75
Query: 126 gcaagttgtgcagttgttgcctcaagcttg 155
||||||||||||||||||||||||||||||
Sbjct: 76 gcaagttgtgcagttgttgcctcaagcttg 105
Score = 85.7 bits (43), Expect = 1e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 19 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaa 43
>42089_osa-MIR444d:mirbase
Length = 143
Score = 125 bits (63), Expect = 1e-29
Identities = 97/106 (91%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 66 actgcattacttgcaagaaagtcacaaaatccattgcaagatcatacttgtggctttctt 125
||||||||||||||||||||| ||||||||| ||| | ||| ||||||||||||||||
Sbjct: 38 actgcattacttgcaagaaaggcacaaaatc-attagatgat--tacttgtggctttctt 94
Query: 126 gcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 171
|||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 95 gcaagttgtgcagttgctgcctcaagcttgctgcctccctctgcca 140
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 1 tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 4 tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63
Query: 61 a 61
|
Sbjct: 64 a 64
Score = 56.0 bits (28), Expect = 9e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 113 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 160
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaagta 64
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaagta 79
>42088_osa-MIR444d:mirbase
Length = 143
Score = 125 bits (63), Expect = 1e-29
Identities = 97/106 (91%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 66 actgcattacttgcaagaaagtcacaaaatccattgcaagatcatacttgtggctttctt 125
||||||||||||||||||||| ||||||||| ||| | ||| ||||||||||||||||
Sbjct: 38 actgcattacttgcaagaaaggcacaaaatc-attagatgat--tacttgtggctttctt 94
Query: 126 gcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 171
|||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 95 gcaagttgtgcagttgctgcctcaagcttgctgcctccctctgcca 140
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 1 tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 4 tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63
Query: 61 a 61
|
Sbjct: 64 a 64
Score = 56.0 bits (28), Expect = 9e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 113 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 160
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaagta 64
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaagta 79
>42087_osa-MIR444d:mirbase
Length = 143
Score = 125 bits (63), Expect = 1e-29
Identities = 97/106 (91%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 66 actgcattacttgcaagaaagtcacaaaatccattgcaagatcatacttgtggctttctt 125
||||||||||||||||||||| ||||||||| ||| | ||| ||||||||||||||||
Sbjct: 38 actgcattacttgcaagaaaggcacaaaatc-attagatgat--tacttgtggctttctt 94
Query: 126 gcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 171
|||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 95 gcaagttgtgcagttgctgcctcaagcttgctgcctccctctgcca 140
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 1 tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 4 tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63
Query: 61 a 61
|
Sbjct: 64 a 64
Score = 56.0 bits (28), Expect = 9e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 113 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 160
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaagta 64
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaagta 79
>42648_tae-MIR444:mirbase
Length = 426
Score = 103 bits (52), Expect = 4e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 108 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcccttt 167
|||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcccttt 181
Query: 168 gcca 171
||||
Sbjct: 182 gcca 185
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaagta 64
|||| ||||| |||||||| |||||||| ||||||||||||| ||||||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaagta 124
>42649_tae-MIR444b:mirbase
Length = 162
Score = 95.6 bits (48), Expect = 1e-20
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 108 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 163
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaagta 64
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 150 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaagta 100
Score = 50.1 bits (25), Expect = 6e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 4 tgcatatggtggcaccaagcatgaggcaggaactgcattacttgc 48
||||| ||| |||||| ||||||||||| |||||||||||||||
Sbjct: 5 tgcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 49
>42084_osa-MIR444b:mirbase
Length = 138
Score = 95.6 bits (48), Expect = 1e-20
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 171
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttg 155
||||||||||| |||||||||| |||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 95.6 bits (48), Expect = 1e-20
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 171
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttg 155
||||||||||| |||||||||| |||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 91.7 bits (46), Expect = 2e-19
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 108 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 161
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaagta 64
|||| ||||| |||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 113 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaagta 63
>42091_osa-MIR444f:mirbase
Length = 154
Score = 89.7 bits (45), Expect = 6e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 119 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 163
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 54.0 bits (27), Expect = 4e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 9 atggtggcaccaagcatgaggcaggaactgcattacttgcaag 51
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 atggtggcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 58
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106
>42086_osa-MIR444c:mirbase
Length = 138
Score = 89.7 bits (45), Expect = 6e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgccag 172
||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgccag 136
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 163
||||||||||| | |||||||| || ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42085_osa-MIR444c:mirbase
Length = 138
Score = 89.7 bits (45), Expect = 6e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgccag 172
||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgccag 136
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 163
||||||||||| | |||||||| || ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 160
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 120 tttcttgcaagttgtgcagttgttgcctcaagcttg 155
||||||||||| | |||||||| |||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>42082_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 6e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 121 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 163
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 53
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 6e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 121 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 163
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 53
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 119 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 163
||||||||||||||||||||||| || ||||||||||||| ||||
Sbjct: 77 ctttcttgcaagttgtgcagttgctgtctcaagcttgctgactcc 121
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 11 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
||||||||||||||||||||| ||||||||||||| |||| |||| ||||
Sbjct: 1 ggtggcaccaagcatgaggcaacaactgcattactttcaaggaagttacaa 51
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 19 caagcatgaggcaggaactgcattacttgcaagaaagtcac 59
||||| |||| ||| ||||||| |||||||||||||||||
Sbjct: 113 caagcttgagacagcaactgcacaacttgcaagaaagtcac 73
>42090_osa-MIR444e:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 126 gcaagttgtgcagttgttgcctcaagcttgctgcct 161
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>41805_bdi-MIR444:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 128 aagttgtgcagttgttgcctcaagcttgctgc 159
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
