miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36537_dme-mir-981:mirbase
Length = 97
Score = 107 bits (54), Expect = 1e-24
Identities = 77/82 (93%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 8 tgaaatcgggtttcgttaacagcgggctgttatgaataaat-caacaagttcgttgtcga 66
|||| ||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 13 tgaagtcgggtttcgttagcagcgggctgtttt-aataaattcaacaagttcgttgtcga 71
Query: 67 cgaaacctgcatgctgtgtgga 88
||||||||||||||||||||||
Sbjct: 72 cgaaacctgcatgctgtgtgga 93
>36538_dme-mir-981:mirbase
Length = 97
Score = 107 bits (54), Expect = 1e-24
Identities = 77/82 (93%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 8 tgaaatcgggtttcgttaacagcgggctgttatgaataaat-caacaagttcgttgtcga 66
|||| ||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 13 tgaagtcgggtttcgttagcagcgggctgtttt-aataaattcaacaagttcgttgtcga 71
Query: 67 cgaaacctgcatgctgtgtgga 88
||||||||||||||||||||||
Sbjct: 72 cgaaacctgcatgctgtgtgga 93
>37286_dsi-mir-981:mirbase
Length = 117
Score = 107 bits (54), Expect = 1e-24
Identities = 77/82 (93%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 8 tgaaatcgggtttcgttaacagcgggctgttatgaataaat-caacaagttcgttgtcga 66
|||| ||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 21 tgaagtcgggtttcgttagcagcgggctgtttt-aataaattcaacaagttcgttgtcga 79
Query: 67 cgaaacctgcatgctgtgtgga 88
||||||||||||||||||||||
Sbjct: 80 cgaaacctgcatgctgtgtgga 101
>35036_dpu-mir-981:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gttcgttgtcgacgaaacctgcat 78
||||||||||||||||||||||||
Sbjct: 60 gttcgttgtcgacgaaacctgcat 83
>35238_aae-mir-981:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 agttcgttgtcgacgaaacctgca 77
||||||||||||||||||||||||
Sbjct: 56 agttcgttgtcgacgaaacctgca 79
>36054_cqu-mir-981:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 agttcgttgtcgacgaaacctgca 77
||||||||||||||||||||||||
Sbjct: 60 agttcgttgtcgacgaaacctgca 83
>37819_tca-mir-981:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 gttcgttgtcgacgaaacctgca 77
|||||||||||||||||||||||
Sbjct: 60 gttcgttgtcgacgaaacctgca 82
>38891_lgi-mir-981:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 gttcgttgtcgacgaaacctgc 76
||||||||||||||||||||||
Sbjct: 42 gttcgttgtcgacgaaacctgc 63
>35324_aga-mir-981:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 ttcgttgtcgacgaaacctgca 77
||||||||||||||||||||||
Sbjct: 63 ttcgttgtcgacgaaacctgca 84
