miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37293_dsi-mir-987-2:mirbase
          Length = 94

 Score =  145 bits (73), Expect = 8e-36
 Identities = 85/89 (95%)
 Strand = Plus / Plus

                                                                      
Query: 9  atgttggactgtgcttaaagtaaatagtctggattgatgaaagttatattcaagaattca 68
          ||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||||||
Sbjct: 1  atgttggactgtgtttaaagtaaatagtctggattgatgaaagttgcattcgagaattca 60

                                       
Query: 69 tcaacaggcatttacttcaactgcagttt 97
          |||||||||||||||||||||||||||||
Sbjct: 61 tcaacaggcatttacttcaactgcagttt 89




>36551_dme-mir-987:mirbase
          Length = 94

 Score =  143 bits (72), Expect = 3e-35
 Identities = 84/88 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 tgttggactgtgcttaaagtaaatagtctggattgatgaaagttatattcaagaattcat 69
          |||||||||||| |||||||||||||||||||||||||||||||  |||| |||||||||
Sbjct: 1  tgttggactgtgtttaaagtaaatagtctggattgatgaaagttgcattcgagaattcat 60

                                      
Query: 70 caacaggcatttacttcaactgcagttt 97
          ||||||||||||||||||||||||||||
Sbjct: 61 caacaggcatttacttcaactgcagttt 88




>36552_dme-mir-987:mirbase
          Length = 94

 Score =  143 bits (72), Expect = 3e-35
 Identities = 84/88 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 tgttggactgtgcttaaagtaaatagtctggattgatgaaagttatattcaagaattcat 69
          |||||||||||| |||||||||||||||||||||||||||||||  |||| |||||||||
Sbjct: 1  tgttggactgtgtttaaagtaaatagtctggattgatgaaagttgcattcgagaattcat 60

                                      
Query: 70 caacaggcatttacttcaactgcagttt 97
          ||||||||||||||||||||||||||||
Sbjct: 61 caacaggcatttacttcaactgcagttt 88




>37292_dsi-mir-987-1:mirbase
          Length = 89

 Score =  139 bits (70), Expect = 5e-34
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                      
Query: 12 ttggactgtgcttaaagtaaatagtctggattgatgaaagttatattcaagaattcatca 71
          |||||||||| |||||||||||||||||||||||||||||||  |||| |||||||||||
Sbjct: 1  ttggactgtgtttaaagtaaatagtctggattgatgaaagttgcattcgagaattcatca 60

                                    
Query: 72 acaggcatttacttcaactgcagttt 97
          ||||||||||||||||||||||||||
Sbjct: 61 acaggcatttacttcaactgcagttt 86