miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37017_dps-mir-2513a:mirbase
          Length = 120

 Score =  238 bits (120), Expect = 8e-64
 Identities = 120/120 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtaaaggaccaacgtactaccatgtaaaccatcttcaaaccataatatttcaatttttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gtaaaggaccaacgtactaccatgtaaaccatcttcaaaccataatatttcaatttttca 61

                                                                       
Query: 61  tattattccttattactatggtctgaagttgctttacatggtagcacgttggtcctctac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  tattattccttattactatggtctgaagttgctttacatggtagcacgttggtcctctac 1



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 5  aggaccaacgtactaccatgtaaaccatcttcaaaccata 44
          ||||||||||| |||||||||||| || ||||| ||||||
Sbjct: 5  aggaccaacgtgctaccatgtaaagcaacttcagaccata 44



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 77  tatggtctgaagttgctttacatggtagcacgttggtcct 116
           |||||| ||||| || |||||||||||| |||||||||||
Sbjct: 77  tatggtttgaagatggtttacatggtagtacgttggtcct 116