miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37023_dps-mir-2517a-2:mirbase
Length = 105
Score = 208 bits (105), Expect = 6e-55
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 ccgggtcaaatggtccagagttttcagatcctcaaataccatatgtattatttgactttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgggtcaaatggtccagagttttcagatcctcaaataccatatgtattatttgactttc 60
Query: 61 atattgatttggtggatttgaaaacttttcacttaagaacacttg 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atattgatttggtggatttgaaaacttttcacttaagaacacttg 105
>37024_dps-mir-2517a-3:mirbase
Length = 105
Score = 208 bits (105), Expect = 6e-55
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 ccgggtcaaatggtccagagttttcagatcctcaaataccatatgtattatttgactttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgggtcaaatggtccagagttttcagatcctcaaataccatatgtattatttgactttc 60
Query: 61 atattgatttggtggatttgaaaacttttcacttaagaacacttg 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atattgatttggtggatttgaaaacttttcacttaagaacacttg 105
>37025_dps-mir-2517a-4:mirbase
Length = 103
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 3 gggtcaaatggtccagagttttcagatcctcaaataccatatgtattatttgactttcat 62
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtgaaatggtccagagttttcagatcctcaaataccatatgtattatttgactttcat 60
Query: 63 attgatttggtggatttgaaaacttttcac 92
||||||||||||||||||||||||||||||
Sbjct: 61 attgatttggtggatttgaaaacttttcac 90
>37026_dps-mir-2517b:mirbase
Length = 115
Score = 163 bits (82), Expect = 3e-41
Identities = 97/101 (96%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 ccgggtcaaatggtccagagttttcagatcctcaaataccatatgtattatttgactttc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 2 ccgggtcaaatggtccagagttttcagatcctcaaatacaatatgtattatttgaatttc 61
Query: 61 atattgatttggtg-gatttgaaaacttttcacttaagaac 100
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 62 atattgatttggtgnnatttgaaaacttttcacttaagaac 102
