miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37029_dps-mir-2518-3:mirbase
          Length = 105

 Score =  121 bits (61), Expect = 9e-29
 Identities = 64/65 (98%)
 Strand = Plus / Plus

                                                                       
Query: 28  tcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 87
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38  tcgaacccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 97

                
Query: 88  gccca 92
           |||||
Sbjct: 98  gccca 102




>37030_dps-mir-2518-4:mirbase
          Length = 105

 Score =  121 bits (61), Expect = 9e-29
 Identities = 64/65 (98%)
 Strand = Plus / Plus

                                                                       
Query: 28  tcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 87
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38  tcgaacccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 97

                
Query: 88  gccca 92
           |||||
Sbjct: 98  gccca 102




>37027_dps-mir-2518-1:mirbase
          Length = 90

 Score =  105 bits (53), Expect = 5e-24
 Identities = 62/65 (95%)
 Strand = Plus / Plus

                                                                      
Query: 28 tcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 87
          |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 26 tcgaacccgttgtgaatcgaacttggttcgagttcgagcagcgggtcgatccgagccata 85

               
Query: 88 gccca 92
          |||||
Sbjct: 86 gccca 90