miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37030_dps-mir-2518-4:mirbase
Length = 105
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 31 gaccggatcgaacccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccg 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 gaccggatcgaacccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccg 90
Query: 91 agccatagcccagcc 105
|||||||||||||||
Sbjct: 91 agccatagcccagcc 105
>37027_dps-mir-2518-1:mirbase
Length = 90
Score = 127 bits (64), Expect = 2e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 31 gaccggatcgaacccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccg 90
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19 gaccggatcgaacccgttgtgaatcgaacttggttcgagttcgagcagcgggtcgatccg 78
Query: 91 agccatagccca 102
||||||||||||
Sbjct: 79 agccatagccca 90
>37028_dps-mir-2518-2:mirbase
Length = 92
Score = 121 bits (61), Expect = 1e-28
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 38 tcgaacccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 97
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 tcgaccccgttgcgaatcgaacttggtttgagttcgagcagcgggtcgatccgagccata 87
Query: 98 gccca 102
|||||
Sbjct: 88 gccca 92
