miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37087_dps-mir-2566a-1:mirbase
          Length = 84

 Score =  127 bits (64), Expect = 1e-30
 Identities = 80/84 (95%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgcatttggctttagaaacacaaagcatgtgtggtatttcaactcatacatatcttg 60
          |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 1  atttgcatttggctttagaaacacaaagcatgtgtggtattttaactcatacataacttg 60

                                  
Query: 61 tgtttc-tagatcaaatgtgagta 83
          ||| || |||||||||||||||||
Sbjct: 61 tgtctcttagatcaaatgtgagta 84




>37088_dps-mir-2566a-2:mirbase
          Length = 86

 Score = 75.8 bits (38), Expect = 4e-15
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgcatttggctttagaaacacaaagcatgtgtggta--tttcaactcatacatatct 58
          ||||||||||   |||||||||||||| |||||||||||  ||| |||||||||||| ||
Sbjct: 2  atttgcatttcaatttagaaacacaaatcatgtgtggtatgttttaactcatacataact 61

                                   
Query: 59 tgtgtttc-tagatcaaatgtgagt 82
          ||||| || ||||||||||||||||
Sbjct: 62 tgtgtctcttagatcaaatgtgagt 86