miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36865_dpe-mir-263a:mirbase
Length = 89
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 1 gtcccgcaccatagatgccactaagagatcacgggttgtattgaaaaaccccgtgaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gtcccgcaccatagatgccactaagagatcacgggttgtattgaaaaaccccgtgaattc 29
Query: 61 ttccagtgccattaactgtgccgggatg 88
||||||||||||||||||||||||||||
Sbjct: 28 ttccagtgccattaactgtgccgggatg 1
>36944_dps-mir-263a:mirbase
Length = 92
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 1 gtcccgcaccatagatgccactaagagatcacgggttgtattgaaaaaccccgtgaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gtcccgcaccatagatgccactaagagatcacgggttgtattgaaaaaccccgtgaattc 30
Query: 61 ttccagtgccattaactgtgccgggatg 88
||||||||||||||||||||||||||||
Sbjct: 29 ttccagtgccattaactgtgccgggatg 2
>36113_dan-mir-263a:mirbase
Length = 90
Score = 133 bits (67), Expect = 2e-32
Identities = 80/83 (96%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 2 tcccgcaccatagatgccactaagagatcacgggttgtattgaaa-aaccccgtgaattc 60
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 87 tcccgcaccatagatgccactaagagatcacgggttgtatagaaattaccccgtgaattc 28
Query: 61 ttccagtgccattaactgtgccg 83
|||||||||||||||||||||||
Sbjct: 27 ttccagtgccattaactgtgccg 5
>36191_der-mir-263a:mirbase
Length = 90
Score = 119 bits (60), Expect = 3e-28
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 5 cgcaccatagatgccactaagagatcacgggttgtattgaaa-aaccccgtgaattcttc 63
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 85 cgcaccatagatgccactaagagatcacgggttgtatcaaaagtaccccgtgaattcttc 26
Query: 64 cagtgccattaactgtgccg 83
||||||||||||||||||||
Sbjct: 25 cagtgccattaactgtgccg 6
>36405_dme-mir-263a:mirbase
Length = 94
Score = 119 bits (60), Expect = 3e-28
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 5 cgcaccatagatgccactaagagatcacgggttgtattgaaa-aaccccgtgaattcttc 63
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 87 cgcaccatagatgccactaagagatcacgggttgtataaaaattaccccgtgaattcttc 28
Query: 64 cagtgccattaactgtgccg 83
||||||||||||||||||||
Sbjct: 27 cagtgccattaactgtgccg 8
>36406_dme-mir-263a:mirbase
Length = 94
Score = 119 bits (60), Expect = 3e-28
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 5 cgcaccatagatgccactaagagatcacgggttgtattgaaa-aaccccgtgaattcttc 63
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 87 cgcaccatagatgccactaagagatcacgggttgtataaaaattaccccgtgaattcttc 28
Query: 64 cagtgccattaactgtgccg 83
||||||||||||||||||||
Sbjct: 27 cagtgccattaactgtgccg 8
>37230_dsi-mir-263a:mirbase
Length = 90
Score = 119 bits (60), Expect = 3e-28
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 5 cgcaccatagatgccactaagagatcacgggttgtattgaaa-aaccccgtgaattcttc 63
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 85 cgcaccatagatgccactaagagatcacgggttgtataaaaattaccccgtgaattcttc 26
Query: 64 cagtgccattaactgtgccg 83
||||||||||||||||||||
Sbjct: 25 cagtgccattaactgtgccg 6
>37519_dya-mir-263a:mirbase
Length = 90
Score = 119 bits (60), Expect = 3e-28
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 5 cgcaccatagatgccactaagagatcacgggttgtattgaaa-aaccccgtgaattcttc 63
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 85 cgcaccatagatgccactaagagatcacgggttgtataaaaagtaccccgtgaattcttc 26
Query: 64 cagtgccattaactgtgccg 83
||||||||||||||||||||
Sbjct: 25 cagtgccattaactgtgccg 6
>36789_dmo-mir-263a:mirbase
Length = 89
Score = 117 bits (59), Expect = 1e-27
Identities = 79/83 (95%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 2 tcccgcaccatagatgccactaagagatcacgggttgtatt-gaaaaaccccgtgaattc 60
|||||||||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 86 tcccgcaccatagatgccactaagagatcacgggc-gtgttagaaaaaccccgtgaattc 28
Query: 61 ttccagtgccattaactgtgccg 83
|||||||||||||||||||||||
Sbjct: 27 ttccagtgccattaactgtgccg 5
>37151_dse-mir-263a:mirbase
Length = 90
Score = 113 bits (57), Expect = 2e-26
Identities = 73/77 (94%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 5 cgcaccatagatgccactaagagatcacgggttgtattgaaa-aaccccgtgaattcttc 63
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 85 cgcaccatagatgccactaagagatcacgggttgtataaaaattaccccgtgaattcttc 26
Query: 64 cagtgccattaactgtg 80
|||||||||||||||||
Sbjct: 25 cagtgccattaactgtg 9
>37444_dwi-mir-263a:mirbase
Length = 91
Score = 111 bits (56), Expect = 8e-26
Identities = 79/84 (94%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 2 tcccgcaccatagatgccactaagagatcacgggt-tgt-attgaaaaaccccgtgaatt 59
||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 88 tcccgcaccatagatgccactaagagatcacgggtgtgttaaataaaaaccccgtgaatt 29
Query: 60 cttccagtgccattaactgtgccg 83
||||||||||||||||||||||||
Sbjct: 28 cttccagtgccattaactgtgccg 5
>36280_dgr-mir-263a:mirbase
Length = 89
Score = 109 bits (55), Expect = 3e-25
Identities = 78/83 (93%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 2 tcccgcaccatagatgccactaagagatcacgggttgtattgaaa-aaccccgtgaattc 60
|||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||
Sbjct: 86 tcccgcaccatagatgccactaagagatcacgggc-gtgttaaaataaccccgtgaattc 28
Query: 61 ttccagtgccattaactgtgccg 83
|||||||||||||||||||||||
Sbjct: 27 ttccagtgccattaactgtgccg 5
>37365_dvi-mir-263a:mirbase
Length = 89
Score = 109 bits (55), Expect = 3e-25
Identities = 78/83 (93%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 2 tcccgcaccatagatgccactaagagatcacgggttgtattg-aaaaaccccgtgaattc 60
|||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 86 tcccgcaccatagatgccactaagagatcacgggc-gtgttataaaaaccccgtgaattc 28
Query: 61 ttccagtgccattaactgtgccg 83
|||||||||||||||||||||||
Sbjct: 27 ttccagtgccattaactgtgccg 5
>35297_aga-mir-263:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 44 aaaaaccccgtgaattcttccagtgccatta 74
||||| |||||||||||||||||||||||||
Sbjct: 43 aaaaatcccgtgaattcttccagtgccatta 13
>37761_tca-mir-263a:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 47 aaccccgtgaattcttccagtgccatt 73
|||||||||||||||||||||||||||
Sbjct: 44 aaccccgtgaattcttccagtgccatt 18
>37762_tca-mir-263a:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 47 aaccccgtgaattcttccagtgccatt 73
|||||||||||||||||||||||||||
Sbjct: 44 aaccccgtgaattcttccagtgccatt 18
>34978_isc-mir-263a:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 48 accccgtgaattcttccagtgccatt 73
||||||||||||||||||||||||||
Sbjct: 46 accccgtgaattcttccagtgccatt 21
>35202_aae-mir-263a:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 50 cccgtgaattcttccagtgccatta 74
|||||||||||||||||||||||||
Sbjct: 37 cccgtgaattcttccagtgccatta 13
>35377_ame-mir-263:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 49 ccccgtgaattcttccagtgccatt 73
|||||||||||||||||||||||||
Sbjct: 40 ccccgtgaattcttccagtgccatt 16
>36030_cqu-mir-263:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 50 cccgtgaattcttccagtgccatta 74
|||||||||||||||||||||||||
Sbjct: 32 cccgtgaattcttccagtgccatta 8
>35019_dpu-mir-263a:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 50 cccgtgaattcttccagtgccatt 73
||||||||||||||||||||||||
Sbjct: 43 cccgtgaattcttccagtgccatt 20
>35545_bmo-mir-263a:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 50 cccgtgaattcttccagtgccatt 73
||||||||||||||||||||||||
Sbjct: 42 cccgtgaattcttccagtgccatt 19
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 gtcccgcaccatagatgccactaagagatcacggg 35
|||| |||||| ||||||||||||||||||||||
Sbjct: 92 gtcctgcaccagtgatgccactaagagatcacggg 58
>35073_api-mir-263a:mirbase
Length = 66
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 48 accccgtgaattcttccagtgccatt 73
||||||||||||||| ||||||||||
Sbjct: 26 accccgtgaattctttcagtgccatt 1
>38872_lgi-mir-183:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 51 ccgtgaattcttccagtgccattaactgt 79
||||||||||| ||||||||||| |||||
Sbjct: 43 ccgtgaattctaccagtgccattcactgt 15
