miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37241_dsi-mir-284:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36432_dme-mir-284:mirbase
Length = 100
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36433_dme-mir-284:mirbase
Length = 100
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
>36205_der-mir-284:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>37534_dya-mir-284:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>36127_dan-mir-284:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
| | ||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcagaagtcagcaacttgattccagcaattgcggccc 98
>36879_dpe-mir-284:mirbase
Length = 98
Score = 155 bits (78), Expect = 7e-39
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>36959_dps-mir-284:mirbase
Length = 100
Score = 155 bits (78), Expect = 7e-39
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggccc 98
>37379_dvi-mir-284:mirbase
Length = 98
Score = 115 bits (58), Expect = 6e-27
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
|||||||||||||||||||||||||||||||||||||| | || |||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaattgcggccc 98
>36294_dgr-mir-284:mirbase
Length = 98
Score = 111 bits (56), Expect = 9e-26
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggc 96
| |||||||||||||||||||||||||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
>37458_dwi-mir-284:mirbase
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 91/100 (91%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtga-gggcaaggcttgaatactg 59
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||| | ||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgttaggggaaaggcttgagcattg 60
Query: 60 c-tcctgaagtcagcaacttgattccagcaattgcggccc 98
| | || |||||||||||||||||||||||||||||||||
Sbjct: 61 catact-aagtcagcaacttgattccagcaattgcggccc 99
>36802_dmo-mir-284:mirbase
Length = 98
Score = 83.8 bits (42), Expect = 2e-17
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
||||||||||||||||| ||||||||||||| |||||| |||| ||||||| | |||
Sbjct: 1 gttgcagttcctggaataaagttgactgtgtcgcctgtaaggggaaggcttttgcattgc 60
Query: 61 tcctgaagtcagcaacttgattccagcaattgcggccc 98
| |||||||||||||||||||||||| ||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaactgcggccc 98
