miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36447_dme-mir-306:mirbase
Length = 85
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 1 tccactcgatggctcaggtacttagtgactctcaatgcctttgacattttgggggtcact 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2 tccactcgatggctcaggtacttagtgactctcaatgcttttgacattttgggggtcact 61
Query: 61 ctgtgcctgtgctgccagtgggac 84
||||||||||||||||||||||||
Sbjct: 62 ctgtgcctgtgctgccagtgggac 85
>36448_dme-mir-306:mirbase
Length = 85
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 1 tccactcgatggctcaggtacttagtgactctcaatgcctttgacattttgggggtcact 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2 tccactcgatggctcaggtacttagtgactctcaatgcttttgacattttgggggtcact 61
Query: 61 ctgtgcctgtgctgccagtgggac 84
||||||||||||||||||||||||
Sbjct: 62 ctgtgcctgtgctgccagtgggac 85
>36213_der-mir-306:mirbase
Length = 85
Score = 151 bits (76), Expect = 9e-38
Identities = 82/84 (97%)
Strand = Plus / Plus
Query: 1 tccactcgatggctcaggtacttagtgactctcaatgcctttgacattttgggggtcact 60
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2 tccactcggtggctcaggtacttagtgactctcaatgcttttgacattttgggggtcact 61
Query: 61 ctgtgcctgtgctgccagtgggac 84
||||||||||||||||||||||||
Sbjct: 62 ctgtgcctgtgctgccagtgggac 85
>37542_dya-mir-306:mirbase
Length = 85
Score = 143 bits (72), Expect = 2e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 1 tccactcgatggctcaggtacttagtgactctcaatgcctttgacattttgggggtcact 60
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2 tccactcggtggctcaggtacttagtgactctcaatgcttttgacattttgggggtcact 61
Query: 61 ctgtgcctgtgctgccagtgggac 84
||||||||||||||||||| ||||
Sbjct: 62 ctgtgcctgtgctgccagtaggac 85
>36135_dan-mir-306:mirbase
Length = 85
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 12 gctcaggtacttagtgactctcaatgcctttgacattttgggggtcactctgtgcctg 69
||||||||||||||||||||||||||| |||||||||||||| | |||| ||||||||
Sbjct: 13 gctcaggtacttagtgactctcaatgcatttgacattttgggagccactttgtgcctg 70
>36885_dpe-mir-306:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 3e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 11 ggctcaggtacttagtgactctcaatgcctttgacattttgggggtcactctgtgcctg 69
|||||||||||||||||||||||||||| || ||||| ||| | ||| |||||||||||
Sbjct: 10 ggctcaggtacttagtgactctcaatgctttcgacatcttgagagtctctctgtgcctg 68
>36967_dps-mir-306:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 3e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 11 ggctcaggtacttagtgactctcaatgcctttgacattttgggggtcactctgtgcctg 69
|||||||||||||||||||||||||||| || ||||| ||| | ||| |||||||||||
Sbjct: 10 ggctcaggtacttagtgactctcaatgctttcgacatcttgagagtctctctgtgcctg 68
>36303_dgr-mir-306:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 gctcaggtacttagtgactctcaat 36
|||||||||||||||||||||||||
Sbjct: 3 gctcaggtacttagtgactctcaat 27
>36809_dmo-mir-306:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 gctcaggtacttagtgactctcaat 36
|||||||||||||||||||||||||
Sbjct: 1 gctcaggtacttagtgactctcaat 25
>37386_dvi-mir-306:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 gctcaggtacttagtgactctcaat 36
|||||||||||||||||||||||||
Sbjct: 6 gctcaggtacttagtgactctcaat 30
>37465_dwi-mir-306-1:mirbase
Length = 64
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 gctcaggtacttagtgactctcaa 35
||||||||||||||||||||||||
Sbjct: 1 gctcaggtacttagtgactctcaa 24
>37466_dwi-mir-306-2:mirbase
Length = 64
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 gctcaggtacttagtgactctcaa 35
||||||||||||||||||||||||
Sbjct: 1 gctcaggtacttagtgactctcaa 24
>36042_cqu-mir-306:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 tggctcaggtacttagtgactctca 34
||||||||||||| |||||||||||
Sbjct: 2 tggctcaggtactgagtgactctca 26
