miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37254_dsi-mir-311:mirbase
Length = 86
Score = 125 bits (63), Expect = 5e-30
Identities = 81/86 (94%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1 tctagataatttttcggacggtatatgagtcaatgttttctttt--tcgaatatattgca 58
||||||| |||||||||||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 1 tctagatcatttttcggacggtatatgagtcaatattttttttttttcgaatatattgca 60
Query: 59 cattcaccggcctgaaaatatcaaga 84
||||||||||||||||||||||||||
Sbjct: 61 cattcaccggcctgaaaatatcaaga 86
>36459_dme-mir-311:mirbase
Length = 84
Score = 111 bits (56), Expect = 8e-26
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 tctagataatttttcggacggtatatgagtcaatgttttctttttcgaatatattgcaca 60
||||||| ||||||||||||||||||| || ||| ||| ||| ||||||||||||||||
Sbjct: 1 tctagatcatttttcggacggtatatgggttaatatttcatttgtcgaatatattgcaca 60
Query: 61 ttcaccggcctgaaaatatcaaga 84
||||||||||||||||||||||||
Sbjct: 61 ttcaccggcctgaaaatatcaaga 84
>36460_dme-mir-311:mirbase
Length = 84
Score = 111 bits (56), Expect = 8e-26
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 tctagataatttttcggacggtatatgagtcaatgttttctttttcgaatatattgcaca 60
||||||| ||||||||||||||||||| || ||| ||| ||| ||||||||||||||||
Sbjct: 1 tctagatcatttttcggacggtatatgggttaatatttcatttgtcgaatatattgcaca 60
Query: 61 ttcaccggcctgaaaatatcaaga 84
||||||||||||||||||||||||
Sbjct: 61 ttcaccggcctgaaaatatcaaga 84
>36219_der-mir-311a:mirbase
Length = 80
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 3 tagataatttttcggacggtatatgagtcaatgttttctttttcgaatatattgcacatt 62
|||||| ||||||||||||||| || |||||| ||| ||| || ||||||||||||||||
Sbjct: 1 tagatagtttttcggacggtatctgcgtcaatatttccttgttagaatatattgcacatt 60
Query: 63 caccggcctgaaaatatcaa 82
||||||||||||||||||||
Sbjct: 61 caccggcctgaaaatatcaa 80
>36222_der-mir-311c:mirbase
Length = 80
Score = 95.6 bits (48), Expect = 5e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 3 tagataatttttcggacggtatatgagtcaatgttttctttttcgaatatattgcacatt 62
|||||| ||||||||||||||| || |||||| ||| ||| || ||||||||||||||||
Sbjct: 1 tagatagtttttcggacggtatctgcgtcaatatttccttgttagaatatattgcacatt 60
Query: 63 caccggcctgaaaatatcaa 82
|||| |||||||||||||||
Sbjct: 61 caccagcctgaaaatatcaa 80
>37547_dya-mir-311a:mirbase
Length = 80
Score = 95.6 bits (48), Expect = 5e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 3 tagataatttttcggacggtatatgagtcaatgttttctttttcgaatatattgcacatt 62
|||||| |||| |||||||||| || |||||| ||| ||| || ||||||||||||||||
Sbjct: 1 tagatagttttgcggacggtatctgcgtcaatatttccttgttagaatatattgcacatt 60
Query: 63 caccggcctgaaaatatcaa 82
||||||||||||||||||||
Sbjct: 61 caccggcctgaaaatatcaa 80
