miRNEST 2.0, an integrative microRNA resource :: BLAST
>42829_zma-MIR408:mirbase
Length = 191
Score = 204 bits (103), Expect = 2e-53
Identities = 173/192 (90%), Gaps = 12/192 (6%)
Strand = Plus / Plus
Query: 2 ggggttggttttaatttg-agacaggcat-aggcagagcatgggatggggccatcaacaa 59
|||||||||||| ||||| ||||||| || || |||||||||||||||||||||||||||
Sbjct: 1 ggggttggttttgatttggagacagggatgagacagagcatgggatggggccatcaacaa 60
Query: 60 agtggagggactagcttgtgagtgcagaaagaaggtgcca------gtggctccctggtg 113
|||||||||||||||||| ||| ||||||||||||||||| ||| ||||| ||||
Sbjct: 61 agtggagggactagcttgcgag-gcagaaagaaggtgccagtgccggtgcctccccggtg 119
Query: 114 aaacgatgatggcagtgttgttgctccctcccctgcactgcctcttccctggctcctccg 173
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 120 aaacgatgatgggagtgttgttgctccctcccctgcactgcctcttccctgg---ctccg 176
Query: 174 atcccccaccgt 185
||||||||||||
Sbjct: 177 atcccccaccgt 188
>42052_osa-MIR408:mirbase
Length = 213
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 129 tgttgttgctccctcccctgcactgcctcttccctggctcc 169
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tgttgttgctccctcccctgcactgcctcttccctggctcc 176
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaaca 58
||||||||||||||||||||| |||||||
Sbjct: 39 aggcagagcatgggatggggctatcaaca 67
>42830_zma-MIR408b:mirbase
Length = 147
Score = 77.8 bits (39), Expect = 3e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 130 gttgttgctccctcccctgcactgcctcttccctggctc 168
|||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
>42464_sof-MIR408c:mirbase
Length = 286
Score = 75.8 bits (38), Expect = 1e-14
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 128 gtgttgttgctccctcccctgcactgcctcttccctggctcc 169
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 229 gtgttgttgcttcctcccctgcactgcctcttccctggctcc 270
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaacaaa 60
|||||||||||||||||||||||||||||||
Sbjct: 31 aggcagagcatgggatggggccatcaacaaa 61
>42463_sof-MIR408b:mirbase
Length = 286
Score = 75.8 bits (38), Expect = 1e-14
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 128 gtgttgttgctccctcccctgcactgcctcttccctggctcc 169
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 229 gtgttgttgcttcctcccctgcactgcctcttccctggctcc 270
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaacaaa 60
|||||||||||||||||||||||||||||||
Sbjct: 31 aggcagagcatgggatggggccatcaacaaa 61
>42462_sof-MIR408a:mirbase
Length = 283
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 129 tgttgttgctccctcccctgcactgcctcttccctggctcc 169
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 227 tgttgttgcttcctcccctgcactgcctcttccctggctcc 267
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaacaaa 60
||||||||||||||||| |||||||||||||
Sbjct: 31 aggcagagcatgggatgaggccatcaacaaa 61
>42600_sbi-MIR408:mirbase
Length = 205
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 128 gtgttgttgctccctcccctgcactgcctcttccctggct 167
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 166 gtgttgttgcttcctcccctgcactgcctcttccctggct 205
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaacaa 59
||||||||||||||||||||||||||||||
Sbjct: 10 aggcagagcatgggatggggccatcaacaa 39
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 129 tgttgttgctccctcccctgcactgcctcttccctggctc 168
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 209 tgttgttgcttcctcccctgcactgcctcttccctggctc 248
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaacaaa 60
||||||||||||||||| |||||||||||||
Sbjct: 13 aggcagagcatgggatgaggccatcaacaaa 43
>42465_sof-MIR408d:mirbase
Length = 215
Score = 67.9 bits (34), Expect = 3e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 128 gtgttgttgctccctcccctgcactgcctcttccctggctcc 169
||||||||||| || |||||||||||||||||||||||||||
Sbjct: 158 gtgttgttgcttccacccctgcactgcctcttccctggctcc 199
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaacaaa 60
|||||||||||||||||||||||||||||||
Sbjct: 31 aggcagagcatgggatggggccatcaacaaa 61
>42647_tae-MIR408:mirbase
Length = 187
Score = 65.9 bits (33), Expect = 1e-11
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 129 tgttgttgctccctcccctgcactgcctcttccctggctcc 169
||||||||||||||||| |||||||||||||||||||||||
Sbjct: 120 tgttgttgctccctccc-tgcactgcctcttccctggctcc 159
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 128 gtgttgttgctccctcccctgcactgcctcttccctggctc 168
||||||||||| || ||||||||||||||||||||||||||
Sbjct: 140 gtgttgttgcttccacccctgcactgcctcttccctggctc 180
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaacaaa 60
|||||||||||||||||||||||||||||||
Sbjct: 13 aggcagagcatgggatggggccatcaacaaa 43
>42466_sof-MIR408e:mirbase
Length = 283
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 30 aggcagagcatgggatggggccatcaacaaa 60
||||||||||||||||| |||||||||||||
Sbjct: 31 aggcagagcatgggatgaggccatcaacaaa 61
Score = 50.1 bits (25), Expect = 6e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 129 tgttgttgctccctcccctgcactgcctcttccctggctcc 169
|||||||||| || |||||||||| |||||||||||||||
Sbjct: 227 tgttgttgcttacttccctgcactgactcttccctggctcc 267
>41252_csi-MIR408:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 140 cctcccctgcactgcctcttccctggctc 168
|||||| ||||||||||||||||||||||
Sbjct: 114 cctcccatgcactgcctcttccctggctc 142
>40391_rco-MIR408:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 143 cccctgcactgcctcttccctggct 167
|||||||||||||||||||||||||
Sbjct: 64 cccctgcactgcctcttccctggct 88
>40108_ath-MIR408:mirbase
Length = 218
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggctcc 169
|||||||||||||||||||||||
Sbjct: 121 tgcactgcctcttccctggctcc 143
>39897_aly-MIR408:mirbase
Length = 211
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggctcc 169
|||||||||||||||||||||||
Sbjct: 118 tgcactgcctcttccctggctcc 140
>41683_vvi-MIR408:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggctc 168
||||||||||||||||||||||
Sbjct: 78 tgcactgcctcttccctggctc 99
>40405_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggctc 168
||||||||||||||||||||||
Sbjct: 82 tgcactgcctcttccctggctc 103
>40404_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggctc 168
||||||||||||||||||||||
Sbjct: 82 tgcactgcctcttccctggctc 103
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggctc 168
||||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggctc 86
>41463_ptc-MIR408:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggct 167
|||||||||||||||||||||
Sbjct: 77 tgcactgcctcttccctggct 97
>41193_aqc-MIR408:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 147 tgcactgcctcttccctggct 167
|||||||||||||||||||||
Sbjct: 21 tgcactgcctcttccctggct 1
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggct 167
|||||||||||||||||||||
Sbjct: 77 tgcactgcctcttccctggct 97
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 147 tgcactgcctcttccctggct 167
|||||||||||||||||||||
Sbjct: 94 tgcactgcctcttccctggct 114
