miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36397_dme-mir-193:mirbase
Length = 108
Score = 198 bits (100), Expect = 7e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 4 tgtgtgcccccattatggttgggattttttagatcagcagttattgctatatagccatat 63
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgtgcccttattatggttgggattttttagatcagcagttattgctatatagccatat 60
Query: 64 ttataaatcttctactggcctactaagtcccaacataatgagagtaaa 111
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttataaatcttctactggcctactaagtcccaacataatgagagtaaa 108
>36398_dme-mir-193:mirbase
Length = 108
Score = 198 bits (100), Expect = 7e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 4 tgtgtgcccccattatggttgggattttttagatcagcagttattgctatatagccatat 63
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgtgcccttattatggttgggattttttagatcagcagttattgctatatagccatat 60
Query: 64 ttataaatcttctactggcctactaagtcccaacataatgagagtaaa 111
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttataaatcttctactggcctactaagtcccaacataatgagagtaaa 108
>36939_dps-mir-193:mirbase
Length = 102
Score = 163 bits (82), Expect = 4e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 12 cccattatggttgggattttttagatcagcagttattgctatatagccatatttataaat 71
|||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||
Sbjct: 5 cccattatagttgggattttttagatcagcagttattgctatacagccgtattaataaat 64
Query: 72 cttctactggcctactaagtcccaacataatgagagta 109
||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cttctactggcctactaagtcccaacataatgagagta 102
>35198_aae-mir-193:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 ctactggcctactaagtcccaac 97
|||||||||||||||||||||||
Sbjct: 71 ctactggcctactaagtcccaac 93
